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Info • Thermomyces lanuginosus SSBP

Status

The genome sequence and gene models of Thermomyces lanuginosus SSBP were not determined by the Joint Genome Institute (JGI), but were provided by the Stajich lab in June, 2016 (also available on NCBI). In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm. JGI tools were used to automatically annotate predicted proteins. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated.

Summary statistics for the Thermomyces lanuginosus SSBP release are below.
Genome Assembly
Genome Assembly size (Mbp) 19.16
Sequencing read coverage depth 48.0x
# of contigs 311
# of scaffolds 311
# of scaffolds >= 2Kbp 303
Scaffold N50 53
Scaffold L50 (Mbp) 0.11
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.48, 0.38, 0.33


Gene Models ExternalModels
length (bp) of: average median
gene 2412 2002
transcript 2178 1813
exon 599 335
intron 91 60
description:
protein length (aa) 537 444
exons per gene 3.64 3
# of gene models 6241


Genome Reference(s)

Funding

This project was not sequenced at the JGI.