Info • Tolypocladium paradoxum NRBC 100945

Status

The genome sequence and gene models of Tolypocladium paradoxum NRBC 100945 were not determined by the Joint Genome Institute (JGI), but were downloaded from Ensembl Fungi on April 11, 2020. Please note that this copy of the genome is not maintained by Ensembl and is therefore not automatically updated. The JGI Annotation Pipeline was used to add additional functional annotation to the author's chromosomes and proteins.


Genome Assembly
Genome Assembly size (Mbp) 27.61
Sequencing read coverage depth
# of contigs 1845
# of scaffolds 1138
# of scaffolds >= 2Kbp 616
Scaffold N50 116
Scaffold L50 (Mbp) 0.08
# of gaps 707
% of scaffold length in gaps 0.3%
Three largest Scaffolds (Mbp) 0.26, 0.25, 0.23


Gene Models ExternalModels
length (bp) of: average median
gene 1826 1554
transcript 1678 1428
exon 609 367
intron 86 62
description:
protein length (aa) 499 413
exons per gene 2.76 2
# of gene models 8983


Genome Reference(s)

Please cite the following publication(s) if you use the data from this genome in your research:

Quandt CA, Patterson W, Spatafora JW
Harnessing the power of phylogenomics to disentangle the directionality and signatures of interkingdom host jumping in the parasitic fungal genus Tolypocladium.
Mycologia. 2018 Jan-Feb;110(1):104-117. doi: 10.1080/00275514.2018.1442618

Funding

This project was not sequenced at the JGI.