Info • Trichosporon asahii var. asahii CBS 8904


The genome sequence and gene prediction of Trichosporon asahii var. asahii CBS 8904 have not been determined by the JGI, but were downloaded from NCBI on June 1, 2017. In order to allow comparative analyses with other fungal genomes sequenced by the Joint Genome Institute, a copy of this genome is incorporated into Mycocosm. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated. Additionally, this copy of the genome does not include the mitochondrial scaffold.

Assembly Method :: GS De Novo Assembler v. 2.6
Sequencing Technology :: 454; Illumina

Summary statistics for the Trichosporon asahii CBS 8904 release are below.
Genome Assembly
Genome Assembly size (Mbp) 25.27
Sequencing read coverage depth 12.4x
# of contigs 410
# of scaffolds 193
# of scaffolds >= 2Kbp 193
Scaffold N50 4
Scaffold L50 (Mbp) 3.22
# of gaps 217
% of scaffold length in gaps 1.0%
Three largest Scaffolds (Mbp) 4.35, 3.79, 3.27

Gene Models ExternalModels
length (bp) of: average median
gene 1689 1379
transcript 1480 1185
exon 473 245
intron 100 61
protein length (aa) 493 395
exons per gene 3.13 3
# of gene models 8507

Genome Reference(s)


This project was not sequenced at the JGI.