Info • Trichoderma gamsii T6085


The genome sequence and gene models of Trichoderma gamsii T6085 were not determined by the Joint Genome Institute (JGI), but were downloaded from NCBI on May 25, 2017. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm. JGI tools were used to automatically annotate predicted proteins. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated.

Summary statistics for the Trichoderma gamsii T6085 release are below.
Genome Assembly
Genome Assembly size (Mbp) 37.97
Sequencing read coverage depth 100.0x
# of contigs 628
# of scaffolds 381
# of scaffolds >= 2Kbp 254
Scaffold N50 30
Scaffold L50 (Mbp) 0.42
# of gaps 247
% of scaffold length in gaps 0.5%
Three largest Scaffolds (Mbp) 1.20, 1.09, 0.98

Gene Models ExternalModels
length (bp) of: average median
gene 1688 1397
transcript 1512 1242
exon 540 300
intron 100 68
protein length (aa) 504 414
exons per gene 2.80 2
# of gene models 10944

Genome Reference(s)


This project was not sequenced at the JGI.