Info • Trichoderma parareesei CBS 125925


[November 2018] The genome sequence and gene models of Trichoderma parareesei CBS 125925 were not determined by the Joint Genome Institute (JGI), but were downloaded from NCBI on Sep 18, 2018. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm. JGI tools were used to automatically annotate predicted proteins. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated.

Summary statistics for the Trichoderma parareesei CBS 125925 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 32.07
Sequencing read coverage depth 250.5X
# of contigs 3678
# of scaffolds 885
# of scaffolds >= 2Kbp 819
Scaffold N50 149
Scaffold L50 (Mbp) 0.07
# of gaps 2793
% of scaffold length in gaps 0.6%
Three largest Scaffolds (Mbp) 0.29, 0.28, 0.20

Gene Models ExternalModels
length (bp) of: average median
gene 1661 1398
transcript 1500 1245
exon 553 296
intron 96 73
protein length (aa) 500 415
exons per gene 2.72 2
# of gene models 9062


Irina S. Druzhinina - TU Wien, Vienna, Austria

Genome Reference(s)


This project was not sequenced at the JGI.