Status
This genome was sequenced using single cell approach. Summary
statistics for the v1.0 release are below.
| Genome Assembly | |
| Genome Assembly size (Mbp} | 120.88 |
| Sequencing read coverage depth | 1x |
| # of contigs | 47675 |
| # of scaffolds | 47675 |
| # of scaffolds >= 2Kbp | 16611 |
| Scaffold N50 | 6687 |
| Scaffold L50 (Mbp) | 0.00 |
| # of gaps | 0 |
| % of scaffold length in gaps | 0.0% |
| Three largest Scaffolds (Mbp) | 0.08, 0.06, 0.06 |
| Gene Models | FilteredModels1 | |
| length (bp) of: | average | median |
| gene | 1304 | 990 |
| transcript | 1154 | 870 |
| exon | 306 | 144 |
| intron | 56 | 49 |
| description: | ||
| protein length (aa) | 385 | 290 |
| exons per gene | 3.77 | 3 |
| # of gene models | 40072 |
Collaborators
Steven Singer, Joint BioEnergy Institute
Funding
The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.
