Info • Verticillium longisporum VL1

Status

The genome sequence and gene models of Verticillium longisporum VL1 were not determined by the Joint Genome Institute (JGI), but were downloaded from Ensembl Fungi on April 11, 2020. Please note that this copy of the genome is not maintained by Ensembl and is therefore not automatically updated. The JGI Annotation Pipeline was used to add additional functional annotation to the author's chromosomes and proteins.

Genome Assembly
Genome Assembly size (Mbp) 99.19
Sequencing read coverage depth
# of contigs 37482
# of scaffolds 28081
# of scaffolds >= 2Kbp 3943
Scaffold N50 164
Scaffold L50 (Mbp) 0.14
# of gaps 9401
% of scaffold length in gaps 28.0%
Three largest Scaffolds (Mbp) 1.40, 1.01, 0.94


Gene Models ExternalModels
length (bp) of: average median
gene 2581 1711
transcript 2019 1410
exon 713 402
intron 309 66
description:
protein length (aa) 450 336
exons per gene 2.83 2
# of gene models 20793


Genome Reference(s)

Funding

This project was not sequenced at the JGI.