Info • Volvariella volvacea V23


The genome sequence and gene prediction of Volvariella volvaces were not determined by the JGI, but were recieved from Dapeng Bao ([email protected]) and have been published (pubmed: 23526973). Please note that this copy of the genome is not maintained by the author and is therefore not automatically updated. This copy of the genome does not include the mitochondrial chromosome or genes. The JGI Annotation Pipeline was used to add additional functional annotation to the author's chromosomes and proteins.

Summary statistics for the Volvariella volvacea V23 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 35.72
Sequencing read coverage depth 190x
# of contigs 1289
# of scaffolds 62
# of scaffolds >= 2Kbp 62
Scaffold N50 9
Scaffold L50 (Mbp) 0.93
# of gaps 1227
% of scaffold length in gaps 0.3%
Three largest Scaffolds (Mbp) 3.95, 2.58, 2.43

Gene Models ExternalModels
length (bp) of: average median
gene 2087 1652
transcript 1571 1281
exon 229 129
intron 90 58
protein length (aa) 524 427
exons per gene 6.86 5
# of gene models 11084

Genome Reference(s)


This project was not sequenced at the JGI.