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Info • Zancudomyces culisetae COL-18-3

Status

The genome sequence and gene models of Zancudomyces culisetae COL-18-3 were not determined by the Joint Genome Institute (JGI), but were downloaded from NCBI on July 3rd, 2017. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm. JGI tools were used to automatically annotate predicted proteins. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated.

Summary statistics for the Zancudomyces culisetae COL-18-3 release are below.
Genome Assembly
Genome Assembly size (Mbp) 28.64
Sequencing read coverage depth
# of contigs 2298
# of scaffolds 1953
# of scaffolds >= 2Kbp 1765
Scaffold N50 323
Scaffold L50 (Mbp) 0.03
# of gaps 345
% of scaffold length in gaps 0.5%
Three largest Scaffolds (Mbp) 0.39, 0.13, 0.11


Gene Models ExternalModels
length (bp) of: average median
gene 1725 1403
transcript 1164 873
exon 657 348
intron 205 126
description:
protein length (aa) 388 291
exons per gene 1.77 1
# of gene models 8067


Collaborators

Yan Wang, University of Toronto

Genome Reference(s)

Funding

This project was not sequenced at the JGI.