Info • Zymoseptoria brevis Zb18110


The genome sequence and gene prediction of Zymoseptoria brevis Zb18110 have not been determined by the JGI, but were downloaded from NCBI on June 1, 2017. In order to allow comparative analyses with other fungal genomes sequenced by the Joint Genome Institute, a copy of this genome is incorporated into Mycocosm. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated.

Assembly Method :: CLC de novo v. 5.5
Sequencing Technology :: Illumina HiSeq

Summary statistics for the Zymoseptoria brevis release are below.
Genome Assembly
Genome Assembly size (Mbp) 31.91
Sequencing read coverage depth 260x
# of contigs 6070
# of scaffolds 6070
# of scaffolds >= 2Kbp 1202
Scaffold N50 196
Scaffold L50 (Mbp) 0.05
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.41, 0.24, 0.23

Gene Models ExternalModels
length (bp) of: average median
gene 1593 1304
transcript 1463 1194
exon 609 320
intron 95 60
protein length (aa) 488 398
exons per gene 2.40 2
# of gene models 10566

Genome Reference(s)


This project was not sequenced at the JGI.