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Jaminaea sp. MCA 5214 v1.0
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TRANSCRIPT ANNOTATION
Jamsp1/scaffold_7:462208-465295
fgenesh1_kg.7_#_175_#_Locus2838v1rpkm58.36
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Attribute
Value
Creator
Action
Name
Description
Model Notes
Defline
expressed protein
AUTOMATIC
Disposition
Catalog
AUTOMATIC
Literature
Assessment
?
Note
Creator
Action
EST evidence
Needs GO
Evidence
Type
Creator
Action
FUNCTIONAL (PROTEIN) ANNOTATION
User-Assigned Ontology
ASPECT
DETAILS
function
 
 
process
 
 
component
 
 
enzyme
 
 
kog
 
 
Automatic Ontology and Best Protein Alignments for transcript 232473
Automatic Ontology
ASPECT
GO/EC
SUPPORT
Action
function
150 Catalysis of the identification and base-pairing of homologous sequences between single-stranded DNA and double-stranded DNA.
IPR006118 Recombinase, conserved site
process
6310 The processes by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction.
IPR006118 Recombinase, conserved site
kog
KOG2505 Ankyrin repeat protein
General function prediction only
High Scoring Alignments
gi|343425846|emb|CBQ69379.1|
conserved hypothetical protein [Sporisorium reilianum SRZ2]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
1220
0.0
20%
87%
87%
gi|388856307|emb|CCF50116.1|
uncharacterized protein [Ustilago hordei]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
1203
0.0
19%
87%
87%
gi|71021761|ref|XP_761111.1|
hypothetical protein UM04964.1 [Ustilago maydis 521] >gi|46100561|gb|EAK85794.1| hypothetical protein UM04964.1 [Ustilago maydis 521]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
1172
0.0
18%
87%
87%
gi|164659674|ref|XP_001730961.1|
hypothetical protein MGL_1960 [Malassezia globosa CBS 7966] >gi|159104859|gb|EDP43747.1| hypothetical protein MGL_1960 [Malassezia globosa CBS 7966]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
953
0.0
14%
88%
87%
gi|170105110|ref|XP_001883768.1|
predicted protein [Laccaria bicolor S238N-H82] >gi|164641403|gb|EDR05664.1| predicted protein [Laccaria bicolor S238N-H82]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
643
2.46141E-39
12%
79%
80%
cne:CNC06290
cytoplasm protein [ Cryptococcus neoformans var. neoformans JEC21]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
630
0.0
26%
98%
97%
gi|390596718|gb|EIN06119.1|
hypothetical protein PUNSTDRAFT_73374 [Punctularia strigosozonata HHB-11173 SS5]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
629
1.60865E-37
12%
78%
80%
gi|169849839|ref|XP_001831618.1|
cytoplasmic protein [Coprinopsis cinerea okayama7#130] >gi|116507256|gb|EAU90151.1| cytoplasmic protein [Coprinopsis cinerea okayama7#130]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
626
3.59983E-37
12%
78%
80%
gi|336368219|gb|EGN96562.1|
hypothetical protein SERLA73DRAFT_184638 [Serpula lacrymans var. lacrymans S7.3] >gi|336380985|gb|EGO22137.1| hypothetical protein SERLADRAFT_472524 [Serpula lacrymans var. lacrymans S7.9]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
625
3.91803E-37
11%
79%
80%
gi|389745701|gb|EIM86882.1|
hypothetical protein STEHIDRAFT_97737 [Stereum hirsutum FP-91666 SS1]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
603
3.15277E-34
11%
78%
80%