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TRANSCRIPT ANNOTATION
Patat1/scaffold_1:860837-862646
fgenesh1_kg.1_#_371_#_Locus3117v1rpkm38.00
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Attribute
Value
Creator
Action
Name
Description
Model Notes
Defline
WD40 repeat-like protein
AUTOMATIC
Disposition
Catalog
AUTOMATIC
Literature
Assessment
?
Note
Creator
Action
EST evidence
Needs GO
Evidence
Type
Creator
Action
FUNCTIONAL (PROTEIN) ANNOTATION
User-Assigned Ontology
ASPECT
DETAILS
function
 
 
process
 
 
component
 
 
enzyme
 
 
kog
 
 
Automatic Ontology and Best Protein Alignments for transcript 993716
Automatic Ontology
ASPECT
GO/EC
SUPPORT
Action
kog
KOG0294 WD40 repeat-containing protein
Function unknown
High Scoring Alignments
gi|154303337|ref|XP_001552076.1|
hypothetical protein BC1G_09417 [Botryotinia fuckeliana B05.10] >gi|150854980|gb|EDN30172.1| hypothetical protein BC1G_09417 [Botryotinia fuckeliana B05.10]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
1263
0.0
51%
86%
87%
gi|347841678|emb|CCD56250.1|
similar to 60S ribosome biogenesis protein Mak11 [Botryotinia fuckeliana]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
1262
0.0
51%
86%
87%
gi|156054274|ref|XP_001593063.1|
hypothetical protein SS1G_05985 [Sclerotinia sclerotiorum 1980] >gi|154703765|gb|EDO03504.1| hypothetical protein SS1G_05985 [Sclerotinia sclerotiorum 1980 UF-70]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
1247
0.0
49%
86%
87%
gi|189205495|ref|XP_001939082.1|
60S ribosome biogenesis protein Mak11 [Pyrenophora tritici-repentis Pt-1C-BFP] >gi|187975175|gb|EDU41801.1| 60S ribosome biogenesis protein Mak11 [Pyrenophora tritici-repentis Pt-1C-BFP]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
1232
0.0
48%
79%
86%
gi|239611631|gb|EEQ88618.1|
60S ribosome biogenesis protein Mak11 [Ajellomyces dermatitidis ER-3] >gi|327348358|gb|EGE77215.1| 60S ribosome biogenesis protein Mak11 [Ajellomyces dermatitidis ATCC 18188]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
1231
0.0
48%
84%
86%
gi|330929496|ref|XP_003302663.1|
hypothetical protein PTT_14571 [Pyrenophora teres f. teres 0-1] >gi|311321852|gb|EFQ89263.1| hypothetical protein PTT_14571 [Pyrenophora teres f. teres 0-1]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
1226
0.0
49%
77%
86%
gi|261201504|ref|XP_002627152.1|
60S ribosome biogenesis protein Mak11 [Ajellomyces dermatitidis SLH14081] >gi|239592211|gb|EEQ74792.1| 60S ribosome biogenesis protein Mak11 [Ajellomyces dermatitidis SLH14081]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
1225
0.0
48%
84%
86%
gi|327304341|ref|XP_003236862.1|
60S ribosome biogenesis protein Mak11 [Trichophyton rubrum CBS 118892] >gi|326459860|gb|EGD85313.1| 60S ribosome biogenesis protein Mak11 [Trichophyton rubrum CBS 118892]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
1205
0.0
46%
93%
86%
gi|396457958|ref|XP_003833592.1|
hypothetical protein LEMA_P063530.1 [Leptosphaeria maculans JN3] >gi|312210140|emb|CBX90227.1| hypothetical protein LEMA_P063530.1 [Leptosphaeria maculans JN3]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
1202
0.00125032
53%
77%
83%
gi|169773707|ref|XP_001821322.1|
60S ribosome biogenesis protein Mak11 [Aspergillus oryzae RIB40] >gi|83769183|dbj|BAE59320.1| unnamed protein product [Aspergillus oryzae RIB40]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
1201
0.0
46%
85%
86%