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Phoma multirostrata 7a v1.0
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TRANSCRIPT ANNOTATION
Phomu1/scaffold_22:278245-283211
estExt_Genemark1.C_220104
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Attribute
Value
Creator
Action
Name
Description
Model Notes
Defline
hypothetical protein
AUTOMATIC
Disposition
Catalog
AUTOMATIC
Literature
Assessment
?
Note
Creator
Action
EST evidence
Needs GO
Evidence
Type
Creator
Action
FUNCTIONAL (PROTEIN) ANNOTATION
User-Assigned Ontology
ASPECT
DETAILS
function
 
 
process
 
 
component
 
 
enzyme
 
 
kog
 
 
Automatic Ontology and Best Protein Alignments for transcript 484772
Automatic Ontology
ASPECT
GO/EC
SUPPORT
Action
function
8270 Interacting selectively with zinc (Zn) ions.
IPR001138 Zn(2)-C6 fungal-type DNA-binding domain
process
6355 Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
IPR001138 Zn(2)-C6 fungal-type DNA-binding domain
component
5634 A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
IPR001138 Zn(2)-C6 fungal-type DNA-binding domain
High Scoring Alignments
gi|396486331|ref|XP_003842390.1|
hypothetical protein LEMA_P081500.1 [Leptosphaeria maculans JN3] >gi|312218966|emb|CBX98911.1| hypothetical protein LEMA_P081500.1 [Leptosphaeria maculans JN3]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
3323
0.0
55%
97%
93%
gi|169614614|ref|XP_001800723.1|
hypothetical protein SNOG_10453 [Phaeosphaeria nodorum SN15] >gi|160702783|gb|EAT81847.2| hypothetical protein SNOG_10453 [Phaeosphaeria nodorum SN15]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
3187
0.0
51%
99%
100%
gi|330933725|ref|XP_003304271.1|
hypothetical protein PTT_16803 [Pyrenophora teres f. teres 0-1] >gi|311319199|gb|EFQ87626.1| hypothetical protein PTT_16803 [Pyrenophora teres f. teres 0-1]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
1683
0.0
69%
39%
35%
gi|189208119|ref|XP_001940393.1|
conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] >gi|187976486|gb|EDU43112.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
1678
0.0
69%
36%
35%
gi|226295358|gb|EEH50778.1|
conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
1066
0.0
36%
73%
68%
gi|225677514|gb|EEH15798.1|
conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
1051
0.0
35%
73%
68%
gi|145249862|ref|XP_001401270.1|
GATA transcription factor (Ams2) [Aspergillus niger CBS 513.88] >gi|134081954|emb|CAK97220.1| unnamed protein product [Aspergillus niger]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
888
0.0
46%
40%
33%
gi|350639667|gb|EHA28021.1|
hypothetical protein ASPNIDRAFT_53897 [Aspergillus niger ATCC 1015]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
888
0.0
46%
40%
33%
gi|358374830|dbj|GAA91419.1|
GATA transcription factor [Aspergillus kawachii IFO 4308]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
886
0.0
46%
40%
33%
gi|242762180|ref|XP_002340324.1|
GATA transcription factor (Ams2), putative [Talaromyces stipitatus ATCC 10500] >gi|218723520|gb|EED22937.1| GATA transcription factor (Ams2), putative [Talaromyces stipitatus ATCC 10500]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
875
0.0
47%
41%
32%