Scheffersomyces stipitis NRRL Y-11545 v2.0

TRANSCRIPT ANNOTATION

Picst3/chr_3.1:856996-857571 e_gwh1.3.1.1054.1 Hide

Attribute

Value

Creator

Action

Name

Description

hypothetical membrane protein

Thomas W. Jeffries

Model Notes

Defline

hypothetical membrane protein

Thomas W. Jeffries

Disposition	Catalog	Thomas W. Jeffries
	Catalog	AUTOMATIC

Literature

Assessment

Note

Creator

Action

EST evidence

Needs GO

Evidence

Type

Creator

Action

FUNCTIONAL (PROTEIN) ANNOTATION

User-Assigned Ontology

ASPECT

DETAILS

function

process

component

enzyme

kog

Automatic Ontology and Best Protein Alignments for transcript 44311

Automatic Ontology

ASPECT

GO/EC

SUPPORT

Action

kog

KOG3292 Predicted membrane protein
Function unknown

High Scoring Alignments

jgi|Picst1|7051|gw1.3.1427.1 [Pichia stipitis]

view alignment

GO/EC Classification

Score

Evalue

% id

% target

% model

ERROR: ERROR

982

0.0

100%

98%

cal:orf19.1477
conserved hypothetical protein [Candida albicans SC5314]

view alignment view info

GO/EC Classification

Score

Evalue

% id

% target

% model

618

0.0

64%

99%

98%

sce:YGL010W
Hypothetical ORF [Saccharomyces cerevisiae]

view alignment view info

GO/EC Classification

Score

Evalue

% id

% target

% model

257

4.6E-27

37%

98%

96%

YGL010w [none]

view alignment

GO/EC Classification

Score

Evalue

% id

% target

% model

257

1.9E-27

37%

98%

96%

gi|1723800|sp|P25338|YGB0_YEAST
Hypothetical 20.2 kDa protein in PRS2-LEU1 intergenic region [Saccharomyces cerevisiae]

view alignment view info

GO/EC Classification

Score

Evalue

% id

% target

% model

16021: Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane.

257

3.9E-27

37%

98%

96%

spo:SPAC16E8.02
hypothetical protein; similar to S. cerevisiae YGL010W [Schizosaccharomyces pombe]

view alignment view info

GO/EC Classification

Score

Evalue

% id

% target

% model

244

2.9E-25

38%

66%

79%

SPAC16E8.02 [none]

view alignment

GO/EC Classification

Score

Evalue

% id

% target

% model

244

1.2E-25

38%

66%

79%

ath:At1g74440
F1M20.12; expressed protein [Arabidopsis thaliana]

view alignment view info

GO/EC Classification

Score

Evalue

% id

% target

% model

228

4.6E-23

31%

94%

97%

At1g74440 [none]

view alignment

GO/EC Classification

Score

Evalue

% id

% target

% model

228

1.9E-23

31%

94%

97%

At1g18720 [none]

view alignment

GO/EC Classification

Score

Evalue

% id

% target

% model

224

6.8E-23

32%

96%

98%