Scheffersomyces stipitis NRRL Y-11545 v2.0

TRANSCRIPT ANNOTATION

Picst3/chr_7.1:871626-880874 e_gwh1.7.1.4.1 Hide

Attribute

Value

Creator

Action

Name

CSF1

Thomas W. Jeffries

Description

similar to a cold sensitivity mutant in budding yeast

Thomas W. Jeffries

Model Notes

Defline

Cold Sensitive for Fermentation in cs mutants, fermentation capacity is almost none at 5 deg C, but restored to wild type at 25 deg C

Thomas W. Jeffries

Disposition	Catalog	AUTOMATIC
	Catalog	AUTOMATIC

Literature

Assessment

Note

Creator

Action

EST evidence

Needs GO

Evidence

Type

Creator

Action

FUNCTIONAL (PROTEIN) ANNOTATION

User-Assigned Ontology

ASPECT

DETAILS

function

process

component

enzyme

kog

Automatic Ontology and Best Protein Alignments for transcript 49353

Automatic Ontology

ASPECT

GO/EC

SUPPORT

Action

kog

KOG3596 Uncharacterized conserved protein
Function unknown

High Scoring Alignments
jgi\|Picst1\|15711\|fgenesh1_pm.C_scaffold_9000112 [Pichia stipitis] view alignment
GO/EC Classification	Score	Evalue	% id	% target	% model
	15525	0.0	98%	100%	100%

cal:orf19.956 CSF1; similar to a cold sensitivity mutant in budding yeast [Candida albicans SC5314] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	6835	0.0	46%	100%	100%

YLR087c [none] view alignment
GO/EC Classification	Score	Evalue	% id	% target	% model
	2981	0.0	23%	100%	100%

sce:YLR087C CSF1; Cold Sensitive for Fermentation in cs mutants, fermentation capacity is almost none at 5 deg C, but restored to wild type at 25 deg C [Saccharomyces cerevisiae] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	2981	0.0	23%	100%	100%

ago:AGR088W AGR088Wp; syntenic homolog of Saccharomyces cerevisiae YLR087C (CSF1) [Eremothecium gossypii] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	2462	0.0	19%	100%	99%

ddi:ng8911 Ylr087cp [Dictyostelium discoideum] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	579	0.0	21%	41%	27%

dme:CG15133-PA CG15133; CG15133 gene product [Drosophila melanogaster] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	289	3.7E-30	20%	28%	23%

7298359 [none] view alignment
GO/EC Classification	Score	Evalue	% id	% target	% model
	289	1.5E-30	20%	28%	23%

rno:361931 LOC361931; similar to RIKEN cDNA 4932438A13 [Rattus norvegicus] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	281	4.7E-29	16%	82%	26%

CE27261 [none] view alignment
GO/EC Classification	Score	Evalue	% id	% target	% model
	253	1.4E-25	3%	55%	97%