Skip To Main Content
JGI Home
Genome Portal
MycoCosm
PhycoCosm
Login
Pseudozyma antarctica T-34
Search
BLAST
Browse
Annotations
Gene Ontology
PFAM Domains
KEGG
KOG
Secondary Metabolism Clusters
CAZymes
Peptidases
Transporters
Transcription Factors
MCL Clusters
Synteny
Download
Info
Home
HELP!
TRANSCRIPT ANNOTATION - annotation is DISABLED
Psean1_1/scaffold_00003:260641-261765
PANT_3c00041
Hide
Attribute
Value
Creator
Action
Name
Description
Model Notes
Defline
Disposition
Catalog
AUTOMATIC
Literature
Assessment
?
Note
Creator
Action
EST evidence
Needs GO
Evidence
Type
Creator
Action
FUNCTIONAL (PROTEIN) ANNOTATION
User-Assigned Ontology
ASPECT
DETAILS
function
 
 
process
 
 
component
 
 
enzyme
 
 
kog
 
 
Automatic Ontology and Best Protein Alignments for transcript 78993
Automatic Ontology
ASPECT
GO/EC
SUPPORT
Action
kog
KOG1474 Transcription initiation factor TFIID, subunit BDF1 and related bromodomain proteins
Transcription
High Scoring Alignments
gi|343425862|emb|CBQ69395.1|
conserved hypothetical protein [Sporisorium reilianum SRZ2]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
1170
0.0
54%
100%
100%
gi|388856332|emb|CCF50141.1|
uncharacterized protein [Ustilago hordei]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
1138
0.0
52%
100%
100%
gi|164659151|ref|XP_001730700.1|
hypothetical protein MGL_2154 [Malassezia globosa CBS 7966] >gi|159104597|gb|EDP43486.1| hypothetical protein MGL_2154 [Malassezia globosa CBS 7966]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
498
0.0
18%
98%
70%
gi|358059243|dbj|GAA94931.1|
hypothetical protein E5Q_01586 [Mixia osmundae IAM 14324]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
422
3.42133E-5
49%
36%
51%
gi|75251317|sp|Q5QD03|SUVH3_CHLRE
RecName: Full=Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3; AltName: Full=Histone H3-K9 methyltransferase 3; Short=H3-K9-HMTase 3; AltName: Full=Suppressor of variegation 3-9 homolog protein 3; Short=Su(var)3-9 homolog protein 3 [Chlamydomonas reinhardtii]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
115
8.6E-7
16%
30%
40%
7302641 [none]
view alignment
GO/EC Classification
Score
Evalue
% id
% target
% model
108
2.0E-6
15%
14%
43%
dme:CG5580-PA
CG5580; CG5580 gene product from transcript CG5580-RA [ Drosophila melanogaster]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
108
1.0E-5
15%
14%
43%
gi|205830876|sp|Q77Z83|IE2_HHV6U
RecName: Full=Immediate-early protein 2; Short=IE2 [Human herpesvirus 6 (strain Uganda-1102)]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
104
2.8E-5
25%
11%
43%
gi|123796763|sp|Q3TTY5|K22E_MOUSE
RecName: Full=Keratin, type II cytoskeletal 2 epidermal; AltName: Full=Cytokeratin-2e; Short=CK-2e; AltName: Full=Epithelial keratin-2e; AltName: Full=Keratin-2 epidermis; AltName: Full=Keratin-2e; Short=K2e; AltName: Full=Type-II keratin Kb2 [Mus musculus]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
104
2.8E-5
31%
17%
32%
gi|306526269|sp|P19837|SPD1_NEPCL
RecName: Full=Spidroin-1; AltName: Full=Dragline silk fibroin 1 [Nephila clavipes]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
103
3.9E-5
25%
20%
41%