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Pseudomicrostroma glucosiphilum gen et sp. nov. MCA 4718 v1.0
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TRANSCRIPT ANNOTATION
Rhodsp1/scaffold_8:278337-283456
fgenesh1_kg.8_#_100_#_Locus5236v1rpkm11.51
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Attribute
Value
Creator
Action
Name
Description
Model Notes
Defline
expressed protein
AUTOMATIC
Disposition
Catalog
AUTOMATIC
Literature
Assessment
?
Note
Creator
Action
EST evidence
Needs GO
Evidence
Type
Creator
Action
FUNCTIONAL (PROTEIN) ANNOTATION
User-Assigned Ontology
ASPECT
DETAILS
function
 
 
process
 
 
component
 
 
enzyme
 
 
kog
 
 
Automatic Ontology and Best Protein Alignments for transcript 283212
Automatic Ontology
ASPECT
GO/EC
SUPPORT
Action
process
7165 The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell.
IPR008936 Rho GTPase activation protein
component
5622 The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
IPR008936 Rho GTPase activation protein
kog
KOG1878 Nuclear receptor coregulator SMRT/SMRTER, contains Myb-like domains
Transcription
High Scoring Alignments
gi|71023593|ref|XP_762026.1|
hypothetical protein UM05879.1 [Ustilago maydis 521] >gi|46101591|gb|EAK86824.1| hypothetical protein UM05879.1 [Ustilago maydis 521]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
1613
0.0
18%
87%
86%
gi|343427396|emb|CBQ70923.1|
conserved hypothetical protein [Sporisorium reilianum SRZ2]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
1564
0.0
16%
87%
86%
gi|388854754|emb|CCF51647.1|
uncharacterized protein [Ustilago hordei]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
1564
0.0
18%
87%
86%
gi|353236283|emb|CCA68281.1|
hypothetical protein PIIN_02145 [Piriformospora indica DSM 11827]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
845
0.0
24%
47%
37%
gi|393215192|gb|EJD00684.1|
hypothetical protein FOMMEDRAFT_22419 [Fomitiporia mediterranea MF3/22]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
833
0.0
24%
47%
41%
gi|393230561|gb|EJD38165.1|
hypothetical protein AURDEDRAFT_116601 [Auricularia delicata TFB-10046 SS5]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
808
0.0
22%
54%
41%
gi|342321387|gb|EGU13321.1|
Hypothetical Protein RTG_00488 [Rhodotorula glutinis ATCC 204091]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
765
0.0
20%
50%
42%
gi|164660374|ref|XP_001731310.1|
hypothetical protein MGL_1493 [Malassezia globosa CBS 7966] >gi|159105210|gb|EDP44096.1| hypothetical protein MGL_1493 [Malassezia globosa CBS 7966]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
747
2.97004E-5
10%
27%
79%
gi|358060213|dbj|GAA93967.1|
hypothetical protein E5Q_00613 [Mixia osmundae IAM 14324]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
701
1.044E-42
16%
47%
42%
gi|395328513|gb|EJF60905.1|
hypothetical protein DICSQDRAFT_127483 [Dichomitus squalens LYAD-421 SS1]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
688
2.53232E-31
10%
62%
57%