Saccharomyces cerevisiae S288C
TRANSCRIPT ANNOTATION 
Sacce1/chrXIII:858296-858889 YMR295C Hide 
AttributeValueCreatorAction
Name  
DescriptionProtein of unknown function that associates with ribosomes; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery and bud; YMR295C is not an essential geneAUTOMATIC 
Model NotesGenBank: S000004910AUTOMATIC 
DeflineIlm1p BIndingAUTOMATIC 
DispositionCatalogAUTOMATIC 
LiteratureJung US and Levin DE (1999) Genome-wide analysis of gene expression regulated by the yeast cell wall integrity signalling pathway. Mol Microbiol 34(5):1049-57 || Peng J, et al. (2003) A proteomics approach to understanding protein ubiquitination. Nat Biotechnol 21(8):921-6 || Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91 || Catic A, et al. (2004) Preferred in vivo ubiquitination sites. Bioinformatics 20(18):3302-7 || Chen Y, et al. (2005) Identification of mitogen-activated protein kinase signaling pathways that confer resistance to endoplasmic reticulum stress in Saccharomyces cerevisiae. Mol Cancer Res 3(12):669-77 || Titz B, et al. (2006) Transcriptional activators in yeast. Nucleic Acids Res 34(3):955-67 || Fleischer TC, et al. (2006) Systematic identification and functional screens of uncharacterized proteins associated with eukaryotic ribosomal complexes. Genes Dev 20(10):1294-307 || Tanaka F, et al. (2006) Functional genomic analysis of commercial baker's yeast during initial stages of model dough-fermentation. Food Microbiol 23(8):717-28 || Buck MJ and Lieb JD (2006) A chromatin-mediated mechanism for specification of conditional transcription factor targets. Nat Genet 38(12):1446-51 || Narayanaswamy R, et al. (2009) Systematic Definition of Protein Constituents along the Major Polarization Axis Reveals an Adaptive Reuse of the Polarization Machinery in Pheromone-Treated Budding Yeast. J Proteome Res 8(1):6-19AUTOMATIC 
Assessment
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NoteCreatorAction
EST evidence  
Needs GO  
EvidenceTypeCreatorAction
 

FUNCTIONAL (PROTEIN) ANNOTATION
User-Assigned Ontology       
ASPECT DETAILS
function
      
process
      
component
      
enzyme
      
kog
      
Automatic Ontology and Best Protein Alignments for transcript 4994
Automatic Ontology
ASPECT
GO/ECSUPPORTAction

High Scoring Alignments 

sce:YMR295C
Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery and bud  [ Saccharomyces cerevisiae]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
1032
0.0
100%
100%
99%

YMR295c  [none]

view alignment    
GO/EC Classification
Score
Evalue
% id
% target
% model
 
1032
0.0
100%
100%
99%

gi|2497220|sp|Q03559|YM8V_YEAST
RecName: Full=Uncharacterized protein YMR295C  [Saccharomyces cerevisiae]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
1032
0.0
100%
100%
99%

gi|6323953|ref|NP_014024.1|
Ymr295cp [Saccharomyces cerevisiae S288c] >gi|2497220|sp|Q03559|YM8V_YEAST RecName: Full=Uncharacterized protein YMR295C >gi|530352|emb|CAA56804.1| unnamed protein product [Saccharomyces cerevisiae] >gi|45269830|gb|AAS56295.1| YMR295C [Saccharomyces cerevisiae] >gi|151946003|gb|EDN64235.1| conserved protein [Saccharomyces cerevisiae YJM789] >gi|256270704|gb|EEU05867.1| YMR295C-like protein [Saccharomyces cerevisiae JAY291] >gi|285814301|tpg|DAA10196.1| TPA: Protein of unknown function that associates with ribosomes; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery and bud; YMR295C is not an essential gene [Saccharomyces cerevisiae S288c]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
950
0.0
100%
92%
91%

gi|207342047|gb|EDZ69928.1|
YMR295Cp-like protein [Saccharomyces cerevisiae AWRI1631] >gi|259148885|emb|CAY82130.1| EC1118_1M3_5094p [Saccharomyces cerevisiae EC1118]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
950
0.0
100%
92%
91%

gi|190408521|gb|EDV11786.1|
conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
946
0.0
99%
92%
91%

gi|50295050|ref|XP_449936.1|
hypothetical protein [Candida glabrata CBS 138] >gi|49529250|emb|CAG62916.1| unnamed protein product [Candida glabrata]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
644
0.0
69%
89%
88%

gi|156847544|ref|XP_001646656.1|
hypothetical protein Kpol_1028p74 [Vanderwaltozyma polyspora DSM 70294] >gi|156117335|gb|EDO18798.1| hypothetical protein Kpol_1028p74 [Vanderwaltozyma polyspora DSM 70294]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
640
0.0
69%
87%
88%

gi|50302993|ref|XP_451434.1|
hypothetical protein [Kluyveromyces lactis NRRL Y-1140] >gi|49640565|emb|CAH03022.1| KLLA0A09933p [Kluyveromyces lactis]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
465
0.0
62%
70%
71%

gi|254581532|ref|XP_002496751.1|
ZYRO0D07304p [Zygosaccharomyces rouxii] >gi|238939643|emb|CAR27818.1| ZYRO0D07304p [Zygosaccharomyces rouxii]  [Zygosaccharomyces rouxii CBS 732]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
460
0.0
55%
83%
84%