Skip To Main Content
JGI Home
Genome Portal
MycoCosm
PhycoCosm
Login
Sporobolomyces linderae CBS 7893 v1.0
Search
BLAST
Browse
Annotations
Gene Ontology
PFAM Domains
KEGG
KOG
Secondary Metabolism Clusters
CAZymes
Peptidases
Transporters
Transcription Factors
MCL Clusters
Synteny
Mitochondrion
Download
Info
Home
Status
HELP!
TRANSCRIPT ANNOTATION
Spoli1/scaffold_4:353726-356150
fgenesh1_kg.4_#_213_#_comp12867_c0_seq1
Hide
Attribute
Value
Creator
Action
Name
Description
Model Notes
Defline
expressed protein
AUTOMATIC
Disposition
Catalog
AUTOMATIC
Literature
Assessment
?
Note
Creator
Action
EST evidence
Needs GO
Evidence
Type
Creator
Action
FUNCTIONAL (PROTEIN) ANNOTATION
User-Assigned Ontology
ASPECT
DETAILS
function
 
 
process
 
 
component
 
 
enzyme
 
 
kog
 
 
Automatic Ontology and Best Protein Alignments for transcript 187814
Automatic Ontology
ASPECT
GO/EC
SUPPORT
Action
function
5488 The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
IPR016024 Armadillo-type fold
High Scoring Alignments
gi|302695399|ref|XP_003037378.1|
hypothetical protein SCHCODRAFT_80870 [Schizophyllum commune H4-8] >gi|300111075|gb|EFJ02476.1| hypothetical protein SCHCODRAFT_80870 [Schizophyllum commune H4-8]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
627
5.01553E-38
14%
90%
90%
gi|392571291|gb|EIW64463.1|
hypothetical protein TRAVEDRAFT_109941 [Trametes versicolor FP-101664 SS1]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
591
1.62227E-37
14%
90%
90%
gi|321264430|ref|XP_003196932.1|
hypothetical protein CGB_L0400C [Cryptococcus gattii WM276] >gi|317463410|gb|ADV25145.1| hypothetical protein CNH00700 [Cryptococcus gattii WM276]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
581
3.9625E-36
12%
91%
90%
gi|170085657|ref|XP_001874052.1|
predicted protein [Laccaria bicolor S238N-H82] >gi|164651604|gb|EDR15844.1| predicted protein [Laccaria bicolor S238N-H82]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
576
1.71532E-31
12%
90%
90%
gi|134117632|ref|XP_772450.1|
hypothetical protein CNBL0650 [Cryptococcus neoformans var. neoformans B-3501A] >gi|50255064|gb|EAL17803.1| hypothetical protein CNBL0650 [Cryptococcus neoformans var. neoformans B-3501A]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
562
1.19069E-33
12%
91%
90%
gi|58270212|ref|XP_572262.1|
hypothetical protein CNH00700 [Cryptococcus neoformans var. neoformans JEC21] >gi|57228520|gb|AAW44955.1| hypothetical protein CNH00700 [Cryptococcus neoformans var. neoformans JEC21]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
562
1.19069E-33
12%
91%
90%
gi|395334939|gb|EJF67315.1|
ARM repeat-containing protein [Dichomitus squalens LYAD-421 SS1]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
560
1.51328E-33
12%
90%
90%
gi|358057610|dbj|GAA96608.1|
hypothetical protein E5Q_03278 [Mixia osmundae IAM 14324]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
541
3.74413E-31
11%
94%
93%
gi|388581302|gb|EIM21611.1|
ARM repeat-containing protein [Wallemia sebi CBS 633.66]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
541
2.8518E-40
9%
92%
90%
gi|390604478|gb|EIN13869.1|
ARM repeat-containing protein [Punctularia strigosozonata HHB-11173 SS5]
view alignment
view info
GO/EC Classification
Score
Evalue
% id
% target
% model
524
4.55505E-25
10%
90%
90%