Sporobolomyces roseus v1.0

TRANSCRIPT ANNOTATION

Sporo1/scaffold_5:683039-685041 e_gw1.5.387.1 Hide

Attribute

Value

Creator

Action

Name

Description

Model Notes

Defline

Disposition

Catalog

AUTOMATIC

Literature

Assessment

Note

Creator

Action

EST evidence

Needs GO

Evidence

Type

Creator

Action

FUNCTIONAL (PROTEIN) ANNOTATION

User-Assigned Ontology

ASPECT

DETAILS

function

process

component

enzyme

kog

Automatic Ontology and Best Protein Alignments for transcript 12913

Automatic Ontology

ASPECT

GO/EC

SUPPORT

Action

function

3700 The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.

IPR000005 Helix-turn-helix, AraC type

process

6355 Any process that modulates the frequency, rate or extent of DNA-dependent transcription.

IPR000005 Helix-turn-helix, AraC type

component

5622 The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.

IPR000005 Helix-turn-helix, AraC type

kog

KOG2542 Uncharacterized conserved protein (YdiU family)
Function unknown

High Scoring Alignments
jgi\|Phchr1\|4214\|fgenesh1_pg.C_scaffold_7000027 [none] view alignment
GO/EC Classification	Score	Evalue	% id	% target	% model
	1131	0.0	36%	72%	91%

Lacbi1FilteredModels3_b_b_jgi\|Lacbi1\|297098 [none] view alignment
GO/EC Classification	Score	Evalue	% id	% target	% model
	1029	0.0	27%	51%	99%

gi\|50256671\|gb\|EAL19394.1\| hypothetical protein CNBH0870 [Cryptococcus neoformans var. neoformans B-3501A] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	931	0.0	24%	79%	96%

gi\|57229080\|gb\|AAW45514.1\| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] >gi\|58271330\|ref\|XP_572821.1\| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	930	0.0	24%	79%	96%

gi\|111065495\|gb\|EAT86615.1\| hypothetical protein SNOG_05551 [Phaeosphaeria nodorum SN15] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	899	0.0	29%	80%	91%

gi\|70991322\|ref\|XP_750510.1\| hypothetical protein Afu1g07640 [Aspergillus fumigatus Af293] >gi\|66848142\|gb\|EAL88472.1\| YdiU domain protein [Aspergillus fumigatus Af293] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	894	0.0	29%	81%	88%

gi\|46121637\|ref\|XP_385373.1\| hypothetical protein FG05197.1 [Gibberella zeae PH-1] >gi\|42551231\|gb\|EAA74074.1\| hypothetical protein FG05197.1 [Gibberella zeae PH-1] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	885	0.0	31%	76%	84%

gi\|39942158\|ref\|XP_360616.1\| hypothetical protein MG03159.4 [Magnaporthe grisea 70-15] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	869	0.0	27%	80%	91%

gi\|90307557\|gb\|EAS37188.1\| hypothetical protein CIMG_02542 [Coccidioides immitis RS] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	865	0.0	32%	72%	79%

gi\|67738160\|ref\|ZP_00488858.1\| COG0397: Uncharacterized conserved protein [Burkholderia pseudomallei 668] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	861	0.0	36%	73%	77%