Gene models with alignments to proteins that match your search term are listed with the following information:
- Name The name of the gene model, a link to the Protein page for the gene model. Click this link to view the Protein page.
- Description A description of the protein, if available.
- Hit Count The number of external proteins found to align with the translated gene under your search settings.
- Max Score The highest score among all external proteins that align with the translated gene under your search settings.
- Min E-Value The lowest E-value among all external proteins that align with the translated gene under your search settings.
- TOP Hit Description The description of the external protein with the best score or E-value.
To see result details for specific gene models, select the check box next to each one that interests you and click Show Details. The following data will appear for each hit:
- Name The ID number of the gene model, a link to the Protein page for the gene model.
- Description A description of the protein coded by the gene, if one is available.
- Score The Smith-Waterman score for the alignment.
- E-value The expectation value for the alignment.
- Target Id The ID number in the external database for the highest scoring protein that aligns with the gene model, a link to the record in the external database.
- Target Description A description of the protein from the external database.
- Tax Name The taxonomy name of the organism in which the protein is found.
Quick Tips
- To view the Protein page for a gene model, click its Name.
- To view the external database's record for a protein that aligns with a translated gene model, click its Target Id.
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