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Info • Aspergillus glaucus v1.0

Status

The Aspergillus glaucus CBS 516.65 genome was sequenced using the Illumina platform, assembled with AllPathsLG release version R41043, and annotated with the JGI annotation pipeline and custom analyses.

Summary statistics for the Aspergillus glaucus CBS 516.65 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp} 27.99
Sequencing read coverage depth 175.9
# of contigs 433
# of scaffolds 82
# of scaffolds >= 2Kbp 69
Scaffold N50 10
Scaffold L50 (Mbp) 1.04
# of gaps 351
% of scaffold length in gaps 0.8%
Three largest Scaffolds (Mbp) 1.83, 1.78, 1.76


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters EstClusters 34438 32023 93.0%


Gene Models FilteredModels1
length (bp) of: average median
gene 1658 1391
transcript 1492 1246
exon 491 287
intron 84 59
description:
protein length (aa) 439 358
exons per gene 3.04 3
# of gene models 11277


Genome Reference(s)

Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.