Blyttiomyces helicus (Rhizophlyctidales, Chytridiomycota) is from an understudied group of fungi and is a specialized saprotroph which grows on pollen. While it has not been cultured despite numerous attempts to do so, the species can be grown to a high density of cells through enrichment methods using spruce pollen. These single cells were used for sequencing and assembly.
B. helicus represents one of many diverse taxa that are of high interest for the 1000 Fungal Genomes project. It has been selected as part of a Fungal single-cell genome sequencing pilot project.
Genome Reference(s)
Please cite the following publication(s) if you use the data from this genome in your research:
Ahrendt SR, Quandt CA, Ciobanu D, Clum A, Salamov A, Andreopoulos B, Cheng JF, Woyke T, Pelin A, Henrissat B, Reynolds NK, Benny GL, Smith ME, James TY, Grigoriev IV
Leveraging single-cell genomics to expand the fungal tree of life.
Nat Microbiol. 2018 Dec;3(12):1417-1428. doi: 10.1038/s41564-018-0261-0
Ahrendt SR, Quandt CA, Ciobanu D, Clum A, Salamov A, Andreopoulos B, Cheng JF, Woyke T, Pelin A, Henrissat B, Reynolds NK, Benny GL, Smith ME, James TY, Grigoriev IV
Leveraging single-cell genomics to expand the fungal tree of life.
Nat Microbiol. 2018 Dec;3(12):1417-1428. doi: 10.1038/s41564-018-0261-0