This genome was sequenced as part of the JGI CSP "1000
Fungal Genomes – Deep Sequencing of Ecologically-relevant
Dikarya" project. Within the framework of this project, we are
sequencing keystone lineages of saprophytic, mycorrhizal, and
endophytic fungi that are of special ecological importance. Dozens
of sequenced species were harvested from Long Term Observatories to
serve as the foundation for a reference database for metagenomics
of fungi and for a comprehensive survey of the soil fungal
metatranscriptome.
Ceriporia viridans
Ceriporia viridans is a common white-rot polypore of
deciduous trees in temperate and boreal Europe. It is found
typically on wood in advanced stage of decay in ground contact.
Most Ceriporia species produce effused, rather thin,
short-lived fruiting bodies, and C. viridans is no
exception. For a polypore its fruiting bodies show a remarkable
array of colors ranging from white to green, from yellow to
purple.
Ceriporia viridans is the type species of the
species-rich genus Ceriporia, and belongs to the family
Irpicaceae of the order Polyporales (Justo et al. 2017). Within
Irpicaceae, it is the first species for which a genome is sequenced
in the Ceriporia clade. All Ceriporia species are
considered white-rotters, but their close relatives in the small
genus Leptoporus (also in the Ceriporia clade)
are considered brown-rotters (Ryvarden & Gilbertson 1993).
Ceriporia viridans was chosen for sequencing as a
representative white-rot fungus and point of comparison with
Leptoporus.
The genome strain was collected from a deciduous fallen tree
(Betula or Sorbus) in central Finland.
The 1KFG project is a large collaborative effort aiming for master
publication(s). Please do contact the PI for 1KFG - Deep Sequencing
of Ecologically-relevant Dikarya (Dr. Francis Martin) for
permission prior to the use of any data in publications.
References
- Justo A, Miettinen O, Floudas D, Ortiz-Santana B, Sjökvist E, Lindner D, Nakasone K, Niemelä T, Larsson K-H, Ryvarden L, Hibbett DS (2017) A revised family-level classification of the Polyporales (Basidiomycota). Fungal Biol 121 (9):798-824. doi:10.1016/j.funbio.2017.05.010
- Ryvarden L, Gilbertson RL (1993) European polypores. Part 1. Abortiporus-Lindtneria, vol 1. European polypores: Part 1: Abortiporus-Lindtneria. Fungiflora, Oslo