Info • Emmonsia crescens UAMH 4076

Status

The genome sequence and gene models of Emmonsia crescens UAMH 4076 were not determined by the Joint Genome Institute (JGI), but were downloaded from Ensembl Fungi on April 11, 2020. Please note that this copy of the genome is not maintained by Ensembl and is therefore not automatically updated. The JGI Annotation Pipeline was used to add additional functional annotation to the author's chromosomes and proteins.


Genome Assembly
Genome Assembly size (Mbp) 33.75
Sequencing read coverage depth
# of contigs 1328
# of scaffolds 1288
# of scaffolds >= 2Kbp 1139
Scaffold N50 104
Scaffold L50 (Mbp) 0.10
# of gaps 40
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.44, 0.40, 0.36


Gene Models ExternalModels
length (bp) of: average median
gene 1665 1410
transcript 1463 1218
exon 482 253
intron 101 80
description:
protein length (aa) 488 406
exons per gene 3.04 3
# of gene models 8908


Genome Reference(s)

Please cite the following publication(s) if you use the data from this genome in your research:

Muñoz JF, McEwen JG, Clay OK, Cuomo CA
Genome analysis reveals evolutionary mechanisms of adaptation in systemic dimorphic fungi.
Sci Rep. 2018 Mar 14;8(1):4473. doi: 10.1038/s41598-018-22816-6

Funding

This project was not sequenced at the JGI.