Info • Emmonsia parva UAMH 130

Status

The genome sequence and gene models of Emmonsia parva UAMH 130 were not determined by the Joint Genome Institute (JGI), but were downloaded from Ensembl Fungi on April 11, 2020. Please note that this copy of the genome is not maintained by Ensembl and is therefore not automatically updated. The JGI Annotation Pipeline was used to add additional functional annotation to the author's chromosomes and proteins.


Genome Assembly
Genome Assembly size (Mbp) 27.84
Sequencing read coverage depth
# of contigs 403
# of scaffolds 383
# of scaffolds >= 2Kbp 340
Scaffold N50 52
Scaffold L50 (Mbp) 0.17
# of gaps 20
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.72, 0.54, 0.50


Gene Models ExternalModels
length (bp) of: average median
gene 1756 1494
transcript 1540 1287
exon 494 257
intron 104 82
description:
protein length (aa) 513 429
exons per gene 3.12 3
# of gene models 8201


Genome Reference(s)

Please cite the following publication(s) if you use the data from this genome in your research:

Muñoz JF, McEwen JG, Clay OK, Cuomo CA
Genome analysis reveals evolutionary mechanisms of adaptation in systemic dimorphic fungi.
Sci Rep. 2018 Mar 14;8(1):4473. doi: 10.1038/s41598-018-22816-6

Funding

This project was not sequenced at the JGI.