Info • Eremomyces bilateralis CBS 781.70 v1.0

Status

[Jan 2015] The Eremomyces bilateralis genome was sequenced using the Illumina platform and assembled with AllPathsLG release version R49403 (Gnerre et al., 2010).
Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Eremomyces bilateralis CBS 781.70 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 26.86
Sequencing read coverage depth 91.1x
# of contigs 321
# of scaffolds 95
# of scaffolds >= 2Kbp 84
Scaffold N50 9
Scaffold L50 (Mbp) 0.81
# of gaps 226
% of scaffold length in gaps 0.9%
Three largest Scaffolds (Mbp) 2.40, 2.11, 1.93


ESTs Data set # sequences total # mapped to genome % mapped to genome
Ests RNNotator assembled Illumina ESTs 27852 27004 97.0%


Gene Models FilteredModels1
length (bp) of: average median
gene 1723 1500
transcript 1577 1350
exon 551 339
intron 80 57
description:
protein length (aa) 443 360
exons per gene 2.86 2
# of gene models 9881


Collaborators

Joseph Spatafora, Oregon State University, USA
Pedro Crous and Manfred Binder at CBS-KNAW, The Netherlands.

Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.