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Info • Fonsecaea monophora CBS 269.37

Status

The genome sequence and gene prediction of Fonsecaea monophora CBS 269.37 have not been determined by the JGI, but were downloaded from NCBI on June 1, 2017. In order to allow comparative analyses with other fungal genomes sequenced by the Joint Genome Institute, a copy of this genome is incorporated into Mycocosm. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated.

Assembly Method :: SPAdes v. 3.6.2
Sequencing Technology :: Illumina MiSeq; IonTorrent

Summary statistics for the Fonsecaea monophora release are below.
Genome Assembly
Genome Assembly size (Mbp) 35.23
Sequencing read coverage depth 90.0x
# of contigs 324
# of scaffolds 324
# of scaffolds >= 2Kbp 297
Scaffold N50 42
Scaffold L50 (Mbp) 0.27
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.14, 0.87, 0.82


Gene Models ExternalModels
length (bp) of: average median
gene 1685 1460
transcript 1528 1335
exon 597 326
intron 102 63
description:
protein length (aa) 509 445
exons per gene 2.56 2
# of gene models 11984


Genome Reference(s)

Funding

This project was not sequenced at the JGI.