Home • Trichocladium griseum var. thermoidea UFV
Photo of Trichocladium griseum var. thermoidea UFV
Trichocladium griseum (Humicola grisea var. thermoidae) grown 4 days, 42 ºC on oat spelt agar medium.

The genome sequence and gene models of Trichocladium griseum (Humicola grisea var. thermoidae) were not determined by the Joint Genome Institute (JGI), but were downloaded from NCBI on Aug 05, 2021 and annotation provided by the authors. In order to ensure this genome is comparable to those sequenced by the JGI, we applied filters to remove if present: 1) transposable elements, 2) pseudogenes, 3) alternative transcripts and overlapping models, 4) alleles on secondary scaffolds, and 5) unsupported short models. This resulted in the removal of 637 models from T. griseum and the generation of the FilteredModels1 gene track. All published models are available in the ExternalModels track. JGI tools were used to automatically annotate predicted proteins. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated.

The ascomycete Humicola grisea var. thermoidea was isolated from Brazilian soil, and it belongs to the Sordariomycetes class and the Sordariales order. The genus Humicola was described in 1914 by Traaen for the species H. fuscoatra and H. griseaHumicola species are capable of growing in a diverse set of substrates including soil, decomposing plant biomass, and agriculture residues. Recently, the genus Humicola was revised through a thorough phylogenetic analysis and H. grisea was renamed as Trichocladium griseum. This fungus is considered thermophilic because it can grow in moderate to high temperatures, with optimal growth of around 40 - 42 °C.

Genome Reference(s)