Info • Lichtheimia corymbifera JMRC:FSU:9682

Status

The assembly and annotation of Lichtheimia corymbifera were not determined at JGI, but were imported for comparative purposes. Please cite Schwartze et al., 2014 if you use these data in your research.

Summary statistics for the Lichtheimia corymbifera JMRC:FSU:9682 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 33.53
Sequencing read coverage depth
# of contigs 562
# of scaffolds 207
# of scaffolds >= 2Kbp 206
Scaffold N50 25
Scaffold L50 (Mbp) 0.37
# of gaps 355
% of scaffold length in gaps 7.6%
Three largest Scaffolds (Mbp) 1.31, 1.25, 1.22


Gene Models ExternalModels
length (bp) of: average median
gene 1602 1332
transcript 1293 1047
exon 259 151
intron 72 64
description:
protein length (aa) 431 349
exons per gene 4.99 4
# of gene models 13404


Genome Reference(s)

Funding

This project was not sequenced at the JGI.