The Lentinula novae-zelandiae ICMP 18003A genome sequence and gene models were not determined by the Joint Genome Institute (JGI), but were provided by Christopher Alan Smith on Jul 8, 2020. In order to ensure this genome is comparable to those sequenced by the JGI, we applied filters to remove if present: 1) transposable elements, 2) pseudogenes, 3) alternative transcripts and overlapping models, 4) alleles on secondary scaffolds and 5) unsupported short models. This resulted in the removal of 678 models from L. novae-zelandiae and the generation of the FilteredModels1 gene track. All provided models are available in the ExternalModels track. Please note that this copy of the genome is not maintained by the author and is therefore not automatically updated. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into MycoCosm. The JGI Annotation Pipeline was used to add functional annotation to this genome.
This strain was collected from the Dunedin Botanic Gardens in Dunedin, New Zealand in 1991 by Dr. Peter Buchanan. It is ICMP culture 18003.
Genome Reference(s)
Smith CA
Macrosynteny analysis between Lentinula edodes and Lentinula novae-zelandiae reveals signals of domestication in Lentinula edodes.
Sci Rep. 2021 May 10;11(1):9845. doi: 10.1038/s41598-021-89146-y