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Info • Melanogaster broomeianus MBLB.BST v1.0

Status

[September 2018] The Melanogaster broomeianus MBLB.BST v1.0 genome was sequenced with PacBio, assembled with AllPathsLG, and annotated with the JGI Annotation Pipeline.

The mitochondrial genome was assembled separately and is available on the Download page.

Summary statistics for the Melanogaster broomeianus MBLB.BST v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 49.61
Sequencing read coverage depth 74.6x
# of contigs 1520
# of scaffolds 1176
# of scaffolds >= 2Kbp 914
Scaffold N50 63
Scaffold L50 (Mbp) 0.20
# of gaps 344
% of scaffold length in gaps 1.5%
Three largest Scaffolds (Mbp) 1.39, 1.35, 0.83


Gene Models FilteredModels1
length (bp) of: average median
gene 1647 1357
transcript 1238 999
exon 193 129
intron 78 58
description:
protein length (aa) 413 333
exons per gene 6.40 5
# of gene models 14167


Genome Reference(s)

Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.