Info • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

## Name Assembly Length # Genes Published
1 Acephala macrosclerotiorum EW76-UTF0540 v1.0 73,683,338 21,024 Miyauchi S et al., 2020
2 Amanita muscaria Koide v1.0 40,699,759 18,153 Kohler A et al., 2015
3 Amanita muscaria var. formosa 2016PMI152 v1.0 110,261,529 15,793
4 Amanita rubescens Přilba v1.0 76,593,165 16,076 Miyauchi S et al., 2020
5 Boletus coccyginus 2016PMI039 v1.0 54,939,811 12,353
6 Boletus edulis BED1 v4.0 66,525,535 18,722 Miyauchi S et al., 2020
7 Boletus edulis Přilba v1.0 69,185,680 18,123 Miyauchi S et al., 2020
8 Cantharellus anzutake C23 v1.0 120,173,979 16,968 Miyauchi S et al., 2020
9 Cenococcum geophilum 1.58 v2.0 177,557,160 14,748 Peter M et al., 2016
10 Ceratobasidium sp. 379 v1.0 83,869,204 17,852
11 Ceratobasidium sp. 394 v1.0 84,469,429 17,873
12 Ceratobasidium sp. 395 v1.0 85,352,376 18,780
13 Ceratobasidium sp. 423 v1.0 131,591,190 25,503
14 Ceratobasidium sp. anastomosis group I; DN8442 v1.0 58,444,101 18,060 Miyauchi S et al., 2020
15 Chalciporus piperatus 201810 CP v1.0 46,257,842 13,336
16 Choiromyces venosus 120613-1 v1.0 126,035,033 17,986 Murat C et al., 2018
17 Cortinarius aff. campbellae TAS5-PSC4363 v1.0 76,968,950 17,407
18 Cortinarius austrovenetus TL2843-KIS7R v1.0 62,325,647 14,941
19 Cortinarius saniosus 2018PMI107 v1.1 209,768,145 26,292
20 Cortinarius sp. KIS3-TL2766 v1.0 50,107,275 11,569
21 Darksidea alpha DSE7016 v1.0 71,864,992 16,839
22 Elaphomyces granulatus OSC145934 54,153,615 7,178 Quandt CA et al., 2015
23 Gautieria morchelliformis GMNE.BST v1.0 122,807,766 20,331 Miyauchi S et al., 2020
24 Geopyxis carbonaria CBS 144460 v1.0 49,454,325 11,663 Steindorff AS et al., 2022
25 Gigaspora margarita BEG34 773,098,546 29,544 Venice F et al., 2020
26 Gigaspora rosea v1.0 567,950,182 31,291 Morin E et al., 2019
27 Gyrodon lividus BX v1.0 43,048,674 11,779 Miyauchi S et al., 2020
28 Hebeloma brunneifolium PMI1Jessy v2.0 65,279,695 20,438
29 Hebeloma cylindrosporum h7 v2.0 38,226,047 15,382 Kohler A et al., 2015
30 Hyaloscypha finlandica PMI_746 v1.0 64,032,857 17,321
31 Hydnum rufescens UP504 v2.0 67,135,451 18,665 Miyauchi S et al., 2020
32 Hysterangium stoloniferum HS.BST v1.0 111,842,964 15,017 Miyauchi S et al., 2020
33 Kalaharituber pfeilii F3 v1.0 78,991,937 15,190 Miyauchi S et al., 2020
34 Kalapuya brunnea GMNB372 v1.0 189,316,756 11,095
35 Kurtia argillacea OMC1749 v1.0 37,148,487 13,652
36 Laccaria amethystina LaAM-08-1 v2.0 52,581,404 17,553 Kohler A et al., 2015
37 Laccaria bicolor 81306 v1.0 50,950,722 17,791
38 Laccaria bicolor CBS 559.96 v1.0 43,460,209 16,977
39 Laccaria bicolor CBS 594.89 v1.0 69,983,628 26,800
40 Laccaria bicolor Cham3 v1.0 44,650,607 16,084
41 Laccaria bicolor D101 v1.0 70,029,479 22,538
42 Laccaria bicolor DR170 v1.0 79,066,865 24,004
43 Laccaria bicolor N203 v1.0 69,628,581 21,909
44 Laccaria bicolor S238N 93.12 v1.1 96,432,810 25,412
45 Laccaria bicolor S238N v1.0 67,655,267 21,724
46 Laccaria bicolor S238N-H53 v1.0 51,780,559 18,468
47 Laccaria bicolor S238N-H70 v1.0 57,049,857 19,903
48 Laccaria bicolor S238N-H82 v1.0 52,023,709 18,706
49 Laccaria bicolor S238N-H82xH70 v1.0 42,115,601 17,045
50 Laccaria bicolor S238O v1.0 57,057,526 17,767
51 Laccaria bicolor v2.0 60,707,050 23,130 Martin F et al., 2008
52 Lactarius akahatsu QP v1.0 80,299,772 12,853 Lebreton A et al., 2022
53 Lactarius controversus PMI44 v1.0 90,370,914 13,305
54 Lactarius deliciosus 48 v1.0 96,043,985 18,193 Lebreton A et al., 2022
55 Lactarius hatsudake 109 v1.0 95,486,030 16,831 Lebreton A et al., 2022
56 Lactarius hengduanensis 84 v1.0 61,963,203 15,957 Lebreton A et al., 2022
57 Lactarius indigo 2018DUKE089 v1.0 90,316,074 16,554 Looney B et al., 2022
58 Lactarius psammicola BPL869 v1.0 69,824,043 13,442 Looney B et al., 2022
59 Lactarius pseudohatsudake 88 v1.0 99,708,583 20,824 Lebreton A et al., 2022
60 Lactarius quietus S23C v1.0 115,901,997 18,943 Miyauchi S et al., 2020
61 Lactarius sanguifluus B21 v1.0 86,240,450 17,481 Lebreton A et al., 2022
62 Lactarius subdulcis FM v1.0 110,449,813 14,533
63 Lactarius vividus 141 v1.0 69,041,955 11,612 Lebreton A et al., 2022
64 Lactifluus cf. subvellereus BPL653 v1.0 44,824,221 12,802 Looney B et al., 2022
65 Lactifluus cf. volemus BPL652 v1.0 62,975,844 14,970 Looney B et al., 2022
66 Leucangium carthusianum GMNB180 v1.0 114,191,169 12,369
67 Mattirolomyces terfezioides MAT_tt4AIII v1.0 50,061,460 10,894
68 Melanogaster broomeianus MBLB.BST v1.0 49,614,189 14,167 Miyauchi S et al., 2020
69 Meliniomyces bicolor E v2.0 82,384,847 18,619 Martino E et al., 2018
70 Meliniomyces sp. PMI_1271 v1.0 62,840,624 17,286
71 Meliniomyces variabilis F v1.0 55,857,776 20,389 Martino E et al., 2018
72 Morchella importuna CCBAS932 v1.0 48,213,273 11,600 Murat C et al., 2018
73 Multifurca ochricompacta BPL690 v1.0 54,697,930 10,514 Looney B et al., 2022
74 Oidiodendron maius Zn v1.0 46,426,256 16,703 Kohler A et al., 2015
75 Paxillus adelphus Ve08.2h10 v2.0 64,458,135 18,999 Kohler A et al., 2015
76 Paxillus ammoniavirescens Pou09.2 v1.0 35,762,581 13,473 Miyauchi S et al., 2020
77 Paxillus involutus ATCC 200175 v1.0 58,301,126 17,968 Kohler A et al., 2015
78 Phlegmacium glaucopus AT 2004 276 v2.0 63,450,306 20,377 Miyauchi S et al., 2020
79 Piloderma byssinum 4S31 v1.0 94,846,070 22,629
80 Piloderma olivaceum F 1598 v1.0 59,326,866 21,583 Kohler A et al., 2015
81 Piloderma sphaerosporum 354 v1.0 71,854,530 20,118
82 Pisolithus albus SI12 v1.0 87,748,750 17,029
83 Pisolithus croceorrhizus ssp. 2 72 v1.0 76,507,182 15,058
84 Pisolithus croceorrhizus subspA 74A v1.0 80,714,400 15,799
85 Pisolithus marmoratus ssp. 2 16A v1.0 122,384,764 21,754
86 Pisolithus microcarpus 441 v2.0 77,250,852 16,766 Kohler A et al., 2015
87 Pisolithus orientalis OTSU v2.0 57,997,239 12,203
88 Pisolithus sp. B1 v1.0 64,705,422 12,451
89 Pisolithus thermaeus 11 v1.0 81,921,463 15,712
90 Pisolithus tinctorius Marx 270 v2.0 92,528,219 16,924 Kohler A et al., 2015
91 Rhizophagus cerebriforme DAOM 227022 v1.0 136,890,557 21,549 Morin E et al., 2019
92 Rhizophagus clarus HR1 116,418,735 27,761 Kobayashi Y et al., 2018
93 Rhizophagus diaphanus v1.0 125,876,003 23,252 Morin E et al., 2019
94 Rhizophagus irregularis A1 v1.0 125,868,962 26,659 Chen ECH et al., 2018
95 Rhizophagus irregularis A4 v1.0 138,301,208 25,760 Chen ECH et al., 2018
96 Rhizophagus irregularis A5 v1.0 131,461,109 26,585 Chen ECH et al., 2018
97 Rhizophagus irregularis B3 v1.0 124,893,935 25,164 Chen ECH et al., 2018
98 Rhizophagus irregularis C2 v1.0 122,966,682 26,756 Chen ECH et al., 2018
99 Rhizophagus irregularis DAOM 181602 v1.0 91,083,792 30,282 Tisserant E et al., 2013
100 Rhizophagus irregularis DAOM 197198 v2.0 136,807,476 26,183 Chen ECH et al., 2018
101 Rhizopogon salebrosus TDB-379 v1.0 82,288,552 18,900
102 Rhizopogon truncatus FC74 v1.0 38,907,862 11,852
103 Rhizopogon vesiculosus Smith 43,809,644 14,218 Mujic AB et al., 2017
104 Rhizopogon vinicolor AM-OR11-026 v1.0 36,102,320 14,469 Mujic AB et al., 2017
105 Rhizopogon vulgaris FC72 v1.0 39,902,050 11,905
106 Rhizoscyphus ericae UAMH 7357 v1.0 57,408,471 16,784 Martino E et al., 2018
107 Russula brevipes BPL707 v1.0 48,529,157 14,000 Looney B et al., 2022
108 Russula compacta BPL669 v1.0 45,678,814 10,834 Looney B et al., 2022
109 Russula dissimulans BPL704 v1.0 44,689,478 11,865 Looney B et al., 2022
110 Russula earlei BPL698 v1.0 70,012,961 12,153 Looney B et al., 2022
111 Russula emetica Přilba v1.0 55,121,418 13,215 Miyauchi S et al., 2020
112 Russula ochroleuca Přilba v1.0 44,738,512 12,048 Miyauchi S et al., 2020
113 Russula rugulosa BPL654 v1.0 43,452,339 13,281 Looney B et al., 2022
114 Russula seminuda PSC4341-TAS1 v1.0 42,095,537 10,669
115 Russula vinacea BPL710 v1.0 43,280,073 12,673 Looney B et al., 2022
116 Scleroderma citrinum Foug A v1.0 56,144,862 21,012 Kohler A et al., 2015
117 Scleroderma citrinum hr. v1.0 77,472,219 10,323
118 Scleroderma yunnanense jo. v1.0 45,547,305 10,194
119 Sebacina vermifera MAFF 305830 v1.0 38,094,242 15,312 Kohler A et al., 2015
120 Serendipita sp. 400 v1.0 38,899,175 10,802
121 Serendipita sp. 405 v1.0 35,358,857 10,849
122 Serendipita sp. 407 v1.0 40,693,196 10,738
123 Serendipita sp. 411 v1.0 38,487,819 10,821
124 Serendipita vermifera ssp. bescii NFPB0129 v1.0 36,850,610 14,208
125 Sistotrema muscicola OMC 1658 v1.0 43,671,079 10,463
126 Sphaerosporella brunnea Sb_GMNB300 v2.0 51,598,955 12,597 Benucci GMN et al., 2019
127 Suillus americanus EM31 v1.0 50,809,076 17,163 Lofgren LA et al., 2021
128 Suillus ampliporus FC55 v1.0 58,334,580 16,527 Lofgren LA et al., 2021
129 Suillus bovinus UH-Sbo-P2 v1.0 47,496,138 13,537 Lofgren LA et al., 2021
130 Suillus brevipes Sb2 v2.0 52,027,859 21,458 Branco S et al., 2015
131 Suillus cf. sibiricus RUI384 v1.0 106,851,732 21,955
132 Suillus cf. subluteus FC464 v1.0 114,207,342 22,673 Lofgren LA et al., 2021
133 Suillus cf. variegatus FC465 v1.0 52,286,509 16,059
134 Suillus clintonianus FC179 v1.0 46,838,326 15,530 Lofgren LA et al., 2021
135 Suillus collinitus S28 v1.0 82,814,809 16,625
136 Suillus cothurnatus VC 1858 v1.0 94,611,779 19,836 Lofgren LA et al., 2021
137 Suillus decipiens EM49 v1.0 62,784,544 16,894 Lofgren LA et al., 2021
138 Suillus discolor FC423 v1.0 60,609,832 16,510 Lofgren LA et al., 2021
139 Suillus elbensis FC64 v1.0 49,992,238 16,813
140 Suillus fuscotomentosus FC203 v1.0 79,655,913 18,512 Lofgren LA et al., 2021
141 Suillus grisellus FC184 v1.0 27,163,220 10,170
142 Suillus hirtellus EM16 v1.0 49,942,187 17,067 Lofgren LA et al., 2021
143 Suillus kaibabensis FC96 v2.0 49,971,042 13,919
144 Suillus lakei FC43 v1.0 79,746,074 19,384 Lofgren LA et al., 2021
145 Suillus luteus UH-Slu-Lm8-n1 v3.0 44,486,502 16,588 Kohler A et al., 2015
146 Suillus occidentalis FC124 v1.0 57,963,537 16,030 Lofgren LA et al., 2021
147 Suillus ochraceoroseus FC498 v1.0 71,521,688 17,772
148 Suillus paluster FC165 v1.0 61,993,750 16,585 Lofgren LA et al., 2021
149 Suillus placidus DOB743 v1.0 55,323,552 15,123 Lofgren LA et al., 2021
150 Suillus placidus S07 v1.0 45,943,075 14,550
151 Suillus plorans S12 v1.0 51,861,001 16,402 Lofgren LA et al., 2021
152 Suillus pseudogranulatus FC45 v1.0 53,289,868 13,672
153 Suillus punctipes FC325 v1.0 48,707,271 14,249
154 Suillus pungens FC27 v1.0 35,632,633 12,148
155 Suillus quiescens AUS223 v1.0 34,515,209 12,072
156 Suillus quiescens FC197 v1.0 44,533,703 12,066
157 Suillus quiescens FC198 v1.0 27,113,927 12,014
158 Suillus sp. nov. FC429 v1.0 45,274,385 14,111
159 Suillus spraguei EM44 v1.0 87,086,403 19,349 Lofgren LA et al., 2021
160 Suillus subalutaceus 1-7C v1.0 39,232,458 13,348
161 Suillus subalutaceus FC151 v1.0 64,971,567 17,080 Lofgren LA et al., 2021
162 Suillus subaureus MN1 v1.0 57,660,940 15,740 Lofgren LA et al., 2021
163 Suillus tomentosus FC115 v1.0 53,063,458 17,198 Lofgren LA et al., 2021
164 Suillus variegatus UH-Sva-Z1 v1.0 64,862,609 17,072 Lofgren LA et al., 2021
165 Suillus viscidus S02 v2.0 74,730,232 22,317
166 Suillus weaverae EM37 v1.0 42,341,223 15,802 Lofgren LA et al., 2021
167 Terfezia boudieri ATCC MYA-4762 v1.1 63,234,573 12,114 Murat C et al., 2018
168 Terfezia claveryi T7 v1.0 74,471,381 12,765 Miyauchi S et al., 2020
169 Thelephora ganbajun P2 v1.0 36,335,475 12,643 Miyauchi S et al., 2020
170 Thelephora terrestris UH-Tt-Lm1 v1.0 40,733,037 13,338 Miyauchi S et al., 2020
171 Tirmania nivea G3 v1.0 63,133,441 10,591 Miyauchi S et al., 2020
172 Tricholoma matsutake 945 v3.0 175,759,688 22,885 Miyauchi S et al., 2020
173 Tricholoma populinum 2016PMI031 v1.0 136,995,582 19,692
174 Trichophaea hybrida UTF0779 v1.0 144,183,925 13,308 Miyauchi S et al., 2020
175 Tuber aestivum var. urcinatum v1.0 144,718,305 9,344 Murat C et al., 2018
176 Tuber borchii Tbo3840 v1.0 97,184,993 12,346 Murat C et al., 2018
177 Tuber brumale v1.0 171,435,277 12,382 Morin E et al., 2021
178 Tuber canaliculatum GB_Tcana1 v1.0 119,018,764 13,111
179 Tuber gibbosum GB_Tgibb2 v1.0 73,833,505 10,490
180 Tuber indicum v1.0 110,494,569 11,872 Morin E et al., 2021
181 Tuber magnatum v1.0 192,781,443 9,433 Murat C et al., 2018
182 Tuber melanosporum Mel28 v1.2 124,945,702 10,058 Martin F et al., 2010
183 Tuber melosporum Tmelo v1.0 114,195,480 14,017
184 Tuber mesentericum Tmes4 v1.0 146,226,558 14,712
185 Tulasnella calospora AL13/4D v1.0 62,392,858 19,659 Kohler A et al., 2015
186 Tulasnella calospora UAMH 9824 v1.0 70,372,952 17,081
187 Tulasnella inquilina UAMH 7632 v1.0 87,139,136 15,519
188 Tulasnella sp. 419 v1.0 56,294,012 13,314
189 Tulasnella sp. 425 v1.0 76,594,216 18,652
190 Tulasnella sp. 427 v1.0 56,306,249 13,260
191 Wilcoxina mikolae CBS 423.85 v1.0 117,288,895 13,093 Miyauchi S et al., 2020
192 Xerocomus badius 84.06 v1.0 38,390,415 14,938 Miyauchi S et al., 2020