Info • Ophiostoma piceae UAMH 11346


The genome sequence and gene prediction of Ophiostoma piceae have not been determined by the JGI, but were downloaded from the NCBI. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated. JGI tools were used to automatically annotate predicted proteins.

The genome and transcriptome of the pine saprophyte Ophiostoma piceae, and a comparison with the bark beetle-associated pine pathogen Grosmannia clavigera


Summary statistics for the Ophiostoma piceae UAMH 11346 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 32.84
Sequencing read coverage depth 100x
# of contigs 343
# of scaffolds 45
# of scaffolds >= 2Kbp 45
Scaffold N50 8
Scaffold L50 (Mbp) 1.45
# of gaps 298
% of scaffold length in gaps 1.0%
Three largest Scaffolds (Mbp) 4.38, 2.92, 2.06

Gene Models ExternalModels
length (bp) of: average median
gene 1829 1535
transcript 1675 1407
exon 741 380
intron 124 72
protein length (aa) 557 468
exons per gene 2.26 2
# of gene models 8884

Genome Reference(s)


This project was not sequenced at the JGI.