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Info • Pluteus cervinus NL-1719 v1.0


(Dec 2015) The Pluteus cervinus NL-1719 genome was sequenced using Illumina and assembled with Velvet and AllPathsLG.

Summary statistics for the Pluteus cervinus NL-1719 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 52.19
Sequencing read coverage depth 138.2x
# of contigs 3329
# of scaffolds 1887
# of scaffolds >= 2Kbp 1392
Scaffold N50 119
Scaffold L50 (Mbp) 0.10
# of gaps 1442
% of scaffold length in gaps 4.5%
Three largest Scaffolds (Mbp) 2.18, 0.96, 0.94

ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 54086 50788 93.9%

Gene Models FilteredModels1
length (bp) of: average median
gene 1658 1408
transcript 1370 1149
exon 258 152
intron 69 56
protein length (aa) 402 325
exons per gene 5.32 4
# of gene models 19818


Joseph W. Spatafora, Oregon State University

László Nagy, Hungarian Academy of Sciences

Genome Reference(s)



The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.