Info • Polytolypa hystricis UAMH 7299

Status

The genome sequence and gene models of Polytolypa hystricis UAMH 7299 were not determined by the Joint Genome Institute (JGI), but were downloaded from Ensembl Fungi on April 11, 2020. Please note that this copy of the genome is not maintained by Ensembl and is therefore not automatically updated. The JGI Annotation Pipeline was used to add additional functional annotation to the author's chromosomes and proteins.


Genome Assembly
Genome Assembly size (Mbp) 34.69
Sequencing read coverage depth
# of contigs 658
# of scaffolds 641
# of scaffolds >= 2Kbp 583
Scaffold N50 79
Scaffold L50 (Mbp) 0.14
# of gaps 17
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.69, 0.53, 0.38


Gene Models ExternalModels
length (bp) of: average median
gene 1637 1379
transcript 1442 1182
exon 465 249
intron 94 73
description:
protein length (aa) 481 394
exons per gene 3.10 3
# of gene models 9934


Genome Reference(s)

Please cite the following publication(s) if you use the data from this genome in your research:

Muñoz JF, McEwen JG, Clay OK, Cuomo CA
Genome analysis reveals evolutionary mechanisms of adaptation in systemic dimorphic fungi.
Sci Rep. 2018 Mar 14;8(1):4473. doi: 10.1038/s41598-018-22816-6

Funding

This project was not sequenced at the JGI.