Info • Rhizopus delemar 99-880 from Broad


The genome sequence and gene prediction of Rhizopus oryzae were not determined by the JGI, but were downloaded from the Rhizopus oryzae Database at the Broad Institute on April 21 2006. Please note that this copy of the genome is not maintained by Broad and is therefore not automatically updated. This copy of the genome does not include the mitochondrial chromosome or genes. The JGI Annotation Pipeline was used to add additional functional annotation to Broad's supercontigs and proteins.

Summary statistics for the Rhizopus oryzae v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp} 46.1
# of contigs 389
# of scaffolds 81
# of scaffolds > 50 Kbp 30
Scaffold N50 6
Scaffold L50 (Mbp) 3.1
% of scaffold length in gaps 1.8%

Gene Models genes
length (bp) of: average
gene 1212
transcript 1028
exon 310
intron 81
protein length (aa) 343
exons per gene 3.32
# of gene models 17467

Genome Reference(s)


This project was not sequenced at the JGI.