Info • Sporothrix brasiliensis 5110


The Sporothrix brasiliensis 5110 genome sequence and gene models were not determined by the Joint Genome Institute (JGI) but were downloaded from Ensembl Fungi on Apr 11, 2020. Please note that this copy of the genome is not maintained by Ensembl and is therefore not automatically updated. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into MycoCosm. The JGI Annotation Pipeline was used to add the functional annotation to this genome.

Genome Assembly
Genome Assembly size (Mbp) 33.17
Sequencing read coverage depth
# of contigs 12
# of scaffolds 12
# of scaffolds >= 2Kbp 12
Scaffold N50 4
Scaffold L50 (Mbp) 3.80
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 6.76, 4.48, 4.33

Gene Models ExternalModels
length (bp) of: average median
gene 1739 1454
transcript 1604 1347
exon 756 422
intron 123 80
protein length (aa) 535 449
exons per gene 2.12 2
# of gene models 9067

Genome Reference(s)


This project was not sequenced at the JGI.