Info • Talaromyces islandicus WF3812

Status

The genome sequence and gene models of Talaromyces islandicus WF3812 were not determined by the Joint Genome Institute (JGI), but were downloaded from Ensembl Fungi on April 11, 2020. Please note that this copy of the genome is not maintained by Ensembl and is therefore not automatically updated. The JGI Annotation Pipeline was used to add additional functional annotation to the author's chromosomes and proteins.

Summary statistics for the Talaromyces islandicus WF3812 are below.
Genome Assembly
Genome Assembly size (Mbp) 34.72
Sequencing read coverage depth
# of contigs 892
# of scaffolds 116
# of scaffolds >= 2Kbp 116
Scaffold N50 4
Scaffold L50 (Mbp) 2.35
# of gaps 776
% of scaffold length in gaps 4.2%
Three largest Scaffolds (Mbp) 6.19, 5.56, 3.90


Gene Models ExternalModels
length (bp) of: average median
gene 1869 1498
transcript 1620 1329
exon 477 256
intron 106 62
description:
protein length (aa) 540 443
exons per gene 3.40 3
# of gene models 9927


Genome Reference(s)

Please cite the following publication(s) if you use the data from this genome in your research:

Schafhauser T, Wibberg D, Rückert C, Winkler A, Flor L, van Pée KH, Fewer DP, Sivonen K, Jahn L, Ludwig-Müller J, Caradec T, Jacques P, Huijbers MM, van Berkel WJ, Weber T, Wohlleben W, Kalinowski J
Draft genome sequence of Talaromyces islandicus ("Penicillium islandicum") WF-38-12, a neglected mold with significant biotechnological potential.
J Biotechnol. 2015 Oct 10;211():101-2. doi: 10.1016/j.jbiotec.2015.07.004

Funding

This project was not sequenced at the JGI.