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Info • Thelebolus microsporus ATCC 90970 v1.0

Status

[Jan 2015] The Thelebolus microsporus genome was sequenced using the Illumina platform and assembled with AllPathsLG release version R49403 (Gnerre et al., 2010).
Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Thelebolus microsporus ATCC 90970 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 27.34
Sequencing read coverage depth 90.3x
# of contigs 169
# of scaffolds 66
# of scaffolds >= 2Kbp 50
Scaffold N50 9
Scaffold L50 (Mbp) 1.19
# of gaps 103
% of scaffold length in gaps 0.6%
Three largest Scaffolds (Mbp) 2.14, 1.76, 1.69


ESTs Data set # sequences total # mapped to genome % mapped to genome
Ests RNNotator assembled Illumina ESTs 27186 25103 92.3%


Gene Models FilteredModels1
length (bp) of: average median
gene 1607 1295
transcript 1491 1185
exon 653 402
intron 92 59
description:
protein length (aa) 417 311
exons per gene 2.28 2
# of gene models 10290


Collaborators

Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.