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Info • Thielaviopsis punctulata CR-DP1

Status

The genome sequence and gene models of Thielaviopsis punctulata CR-DP1 were not determined by the Joint Genome Institute (JGI), but were downloaded from Ensembl Fungi on April 11, 2020. Please note that this copy of the genome is not maintained by Ensembl and is therefore not automatically updated. The JGI Annotation Pipeline was used to add additional functional annotation to the author's chromosomes and proteins.


Genome Assembly
Genome Assembly size (Mbp) 28.12
Sequencing read coverage depth
# of contigs 2737
# of scaffolds 2315
# of scaffolds >= 2Kbp 852
Scaffold N50 87
Scaffold L50 (Mbp) 0.09
# of gaps 422
% of scaffold length in gaps 0.7%
Three largest Scaffolds (Mbp) 0.48, 0.39, 0.31


Gene Models ExternalModels
length (bp) of: average median
gene 1825 1531
transcript 1639 1365
exon 617 316
intron 114 72
description:
protein length (aa) 546 455
exons per gene 2.65 2
# of gene models 5296


Genome Reference(s)

Funding

This project was not sequenced at the JGI.