Info • Tilletiopsis albescens v1.0


[Feb 2016] The Tilletiopsis albescens NRRL Y-17547 genome was sequenced using the Illumina platform and assembled together with AllPathsLG release version R49403, (Gnerre et al., 2010). Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Tilletiopsis albescens NRRL Y-17547 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 24.47
Sequencing read coverage depth 137x
# of contigs 889
# of scaffolds 851
# of scaffolds >= 2Kbp 790
Scaffold N50 142
Scaffold L50 (Mbp) 0.05
# of gaps 38
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 0.25, 0.23, 0.20

ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 23426 22651 96.7%
Ests est.fasta 104474046 98298602 94.1%

Gene Models FilteredModels1
length (bp) of: average median
gene 2187 1921
transcript 1733 1405
exon 362 206
intron 122 94
protein length (aa) 491 375
exons per gene 4.78 4
# of gene models 8471




Jon Magnuson, Pacific Northwest National Laboratory, USA

Joseph Spatafora, Oregon State University, USA


The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.