Info • Trichosporon asahii var. asahii CBS 2479


The genome sequence and gene prediction of Trichosporon asahii var. asahii CBS 2479 have not been determined by the JGI, but were downloaded from NCBI on June 1, 2017. In order to allow comparative analyses with other fungal genomes sequenced by the Joint Genome Institute, a copy of this genome is incorporated into Mycocosm. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated. Additionally, this copy of the genome does not include the mitochondrial scaffold.

Assembly Method :: GS De Novo Assembler v. 2.6
Sequencing Technology :: 454; Illumina

Summary statistics for the Trichosporon asahii CBS 2479 release are below.
Genome Assembly
Genome Assembly size (Mbp) 24.27
Sequencing read coverage depth 12.4x
# of contigs 341
# of scaffolds 341
# of scaffolds >= 2Kbp 339
Scaffold N50 55
Scaffold L50 (Mbp) 0.15
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.46, 0.42, 0.37

Gene Models ExternalModels
length (bp) of: average median
gene 1697 1389
transcript 1489 1200
exon 473 246
intron 99 61
protein length (aa) 496 400
exons per gene 3.15 3
# of gene models 8300

Genome Reference(s)


This project was not sequenced at the JGI.