Info • Trichodelitschia bisporula CBS 262.69 v1.0


[Dec 2014] The Trichodelitschia bisporula CBS 262.69 genome was sequenced using the Illumina platform and assembled together with AllPathsLG version R49403, (Gnerre et al., 2010).
Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Trichodelitschia bisporula CBS 262.69 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 25.79
Sequencing read coverage depth 85.5x
# of contigs 253
# of scaffolds 44
# of scaffolds >= 2Kbp 35
Scaffold N50 9
Scaffold L50 (Mbp) 1.06
# of gaps 209
% of scaffold length in gaps 0.7%
Three largest Scaffolds (Mbp) 2.04, 1.91, 1.88

ESTs Data set # sequences total # mapped to genome % mapped to genome
Ests RNNotator_assembled_Illumina_ESTs 22754 22214 97.6%

Gene Models FilteredModels1
length (bp) of: average median
gene 1644 1384
transcript 1510 1260
exon 537 340
intron 76 52
protein length (aa) 420 332
exons per gene 2.81 2
# of gene models 10181


Joseph Spatafora, Oregon State University, USA
Pedro Crous and Manfred Binder at CBS-KNAW, The Netherlands.

Genome Reference(s)


The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.