Info • Trichophyton violaceum CMCC(F)T3l

Status

The genome sequence and gene models of Trichophyton violaceum CMCC(F)T3l were not determined by the Joint Genome Institute (JGI), but were downloaded from Ensembl Fungi on April 11, 2020. Please note that this copy of the genome is not maintained by Ensembl and is therefore not automatically updated. The JGI Annotation Pipeline was used to add additional functional annotation to the author's chromosomes and proteins.


Genome Assembly
Genome Assembly size (Mbp) 23.37
Sequencing read coverage depth
# of contigs 787
# of scaffolds 261
# of scaffolds >= 2Kbp 59
Scaffold N50 5
Scaffold L50 (Mbp) 1.34
# of gaps 526
% of scaffold length in gaps 0.5%
Three largest Scaffolds (Mbp) 4.06, 3.44, 2.01


Gene Models ExternalModels
length (bp) of: average median
gene 1792 1497
transcript 1597 1317
exon 488 250
intron 87 68
description:
protein length (aa) 532 439
exons per gene 3.27 3
# of gene models 7037


Genome Reference(s)

Funding

This project was not sequenced at the JGI.