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Home • Yarrowia lipolytica CLIB89(W29)
CIRCOS overview of gene features.
CIRCOS overview of gene features.
(A) Chromosomal genes. Outer ring, chromosomes. First mapping track [RNA polymerase II (POL2)-transcribed genes]: LINE retroelements (outward light grey posts), overlapping genes on both strands (inward blue posts), POL2 less than 1 kb (blue rings), POL2 between 1 kb and 5 kb (light green rings), POL2 between 5 kb and 10 kb (green rings), and POL2 > 10 kb (red rings). The next inner track (POL3 and POL2 ncRNA genes), tRNA (green), rRNA (orange), and ncRNA genes (dark yellow). (B) Mitochondrial genes. Transcripts from exons (longer spanning light blue wedges); transcripts from introns (narrower and taller overlapping wedges); CDS (gray); tDNA (purple); and rDNA (yellow). Outer track shows variants comparison with the CLIB122 assembly (http://www.ncbi.nlm.nih.gov/nuccore/NC_002659.1): mismatches (black posts); insertions (green) and deletions (red) relative to the CLIB122 assembly.
from Magnan et al, 2016 Used under a Creative Commons Attribution License.

Yarrowia lipolytica is an oleaginous yeast that is capable of accumulating significant cellular mass in lipid making it an important source of biosustainable hydrocarbon-based chemicals.

The genome sequence and gene prediction of Yarrowia lipolytica strain W29/CLIB89 have not been determined by the Joint Genome Institute (JGI), but were downloaded from NCBI on March 19, 2019. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated. JGI tools were used to automatically annotate predicted proteins.

Genome Reference(s)