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You can see a list of the predicted gene products in the JGI genome that are assigned to a particular GO term and its children. You can also view the Protein pages for the gene products and download the sequences.
Quick Tip
- To view gene products assigned to a term, from the table, click
the number in a column row after the term.
The Gene Products page includes the following:
- A text search
- The term's lineage
- Gene Products
The Term's Lineage
A tree showing the term and its parent relationships but no children.
Gene Products
These are grouped by the GO terms to which they are assigned. They include:
- Gene symbol (e.g., C_1090047) JGI's name for
the gene product. If the gene was predicted by another center, the
name is the one assigned by that center.
- Links Links to the gene's Protein page (P)
and the annotation area for the gene (A) and the locus
(L).
- JGI DB The name of the assembly version in
which the gene product is predicted.
- Quality The abbreviated evidence
type used to associate the gene product with the term.
- All Xref A list of external references for the association of the gene product with the term
In the Links column, click on:
- P to see the Protein page for a gene product.
- A to see the annotation area for a gene product
(if it is active).
- L to see the annotation area for a locus (if it
is active).
Quick Tip
- To see a Gene Products page for a child term under which gene products
are listed, click the term's GO ID number.
Download options
- Proteins Download protein sequences for all
the checked gene products
- Transcripts Download nucleotide sequences for all
the checked gene products
- Check All Select all gene products currently shown
- Uncheck All Deselect all gene products currently shown
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