Info • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

## Name Assembly Length # Genes Published
1 Acephala macrosclerotiorum EW76-UTF0540 v1.0 73,683,338 21,024 Miyauchi S et al., 2020
2 Amanita aff. conicoverrucosa KIS12 v1.0 73,090,178 10,566
3 Amanita aff. grandis KIS10 v1.0 120,562,832 14,613
4 Amanita muscaria Koide v1.0 40,699,759 18,153 Kohler A et al., 2015
5 Amanita muscaria var. formosa 2016PMI152 v1.0 110,261,529 15,793
6 Amanita rubescens BavarianF08 v1.0 70,585,415 14,998
7 Amanita rubescens Přilba v1.0 76,593,165 16,076 Miyauchi S et al., 2020
8 Boletus coccyginus 2016PMI039 v1.0 54,939,811 12,353
9 Boletus edulis BED1 v4.0 66,525,535 18,722 Miyauchi S et al., 2020
10 Boletus edulis Přilba v1.0 69,185,680 18,123 Miyauchi S et al., 2020
11 Boletus reticuloceps BR01 55,835,099 13,195 Wu G et al., 2022
12 Butyriboletus roseoflavus v1.0 33,976,981 12,051 Wu G et al., 2022
13 Cantharellus anzutake C23 v1.0 120,173,979 16,968 Miyauchi S et al., 2020
14 Cenococcum geophilum 1.58 v2.0 177,557,160 14,748 Peter M et al., 2016
15 Ceratobasidium sp 535-2 v1.0 131,447,488 25,446
16 Ceratobasidium sp. 379 v1.0 83,869,204 17,852
17 Ceratobasidium sp. 394 v1.0 84,469,429 17,873
18 Ceratobasidium sp. 395 v1.0 85,352,376 18,780
19 Ceratobasidium sp. 423 v1.0 131,591,190 25,503
20 Ceratobasidium sp. anastomosis group I; DN8442 v1.0 58,444,101 18,060 Miyauchi S et al., 2020
21 Chalciporus piperatus 201810 CP v1.0 46,257,842 13,336
22 Chiua virens LA06 48,496,802 13,144 Wu G et al., 2022
23 Choiromyces venosus 120613-1 v1.0 126,035,033 17,986 Murat C et al., 2018
24 Cortinarius abnormis TAS10R v1.0 190,430,036 17,498
25 Cortinarius aff. campbellae TAS5-PSC4363 v1.0 76,968,950 17,407
26 Cortinarius archeri SA1 v1.0 87,732,974 15,180
27 Cortinarius austrovenetus TL2843-KIS7R v1.0 62,325,647 14,941
28 Cortinarius saniosus 2018PMI107 v2.0 210,564,141 26,370
29 Cortinarius sp. KIS3-TL2766 v1.0 50,107,275 11,569
30 Cortinarius sp. TAS3 v1.0 141,787,444 20,244
31 Darksidea alpha DSE7016 v1.0 71,864,992 16,839
32 Elaphomyces granulatus Maridalen v1.0 79,188,154 15,291
33 Elaphomyces granulatus OSC145934 54,153,615 7,178 Quandt CA et al., 2015
34 Elaphomyces muricatus BavarianF46 v1.0 80,636,695 15,417
35 Gautieria morchelliformis GMNE.BST v1.0 122,807,766 20,331 Miyauchi S et al., 2020
36 Geopyxis carbonaria CBS 144460 v1.0 49,454,325 11,663 Steindorff AS et al., 2022
37 Gigaspora margarita BEG34 773,098,546 29,544 Venice F et al., 2020
38 Gigaspora rosea v1.0 567,950,182 31,291 Morin E et al., 2019
39 Gyrodon lividus BX v1.0 43,048,674 11,779 Miyauchi S et al., 2020
40 Hebeloma brunneifolium PMI1Jessy v2.0 65,279,695 20,438
41 Hebeloma cylindrosporum h7 v2.0 38,226,047 15,382 Kohler A et al., 2015
42 Hyaloscypha finlandica PMI_746 v1.0 64,032,857 17,321
43 Hyaloscypha variabilis MD1 v1.0 59,426,677 20,037
44 Hydnum rufescens UP504 v2.0 67,135,451 18,665 Miyauchi S et al., 2020
45 Hysterangium stoloniferum HS.BST v1.0 111,842,964 15,017 Miyauchi S et al., 2020
46 Inosperma lanatodiscum 2018PMI007 v1.0 123,813,904 23,215
47 Kalaharituber pfeilii F3 v1.0 78,991,937 15,190 Miyauchi S et al., 2020
48 Kalapuya brunnea GMNB372 v1.0 189,316,756 11,095
49 Kurtia argillacea OMC1749 v1.0 37,148,487 13,652
50 Laccaria amethystina LaAM-08-1 v2.0 52,581,404 17,553 Kohler A et al., 2015
51 Laccaria bicolor 81306 v1.0 50,950,722 17,791
52 Laccaria bicolor CBS 559.96 v1.0 43,460,209 16,977
53 Laccaria bicolor CBS 594.89 v1.0 69,983,628 26,800
54 Laccaria bicolor Cham3 v1.0 44,650,607 16,084
55 Laccaria bicolor D101 v1.0 70,029,479 22,538
56 Laccaria bicolor DR170 v1.0 79,066,865 24,004
57 Laccaria bicolor N203 v1.0 69,628,581 21,909
58 Laccaria bicolor S238N 93.12 v1.1 96,432,810 25,412
59 Laccaria bicolor S238N v1.0 67,655,267 21,724
60 Laccaria bicolor S238N-H53 v1.0 51,780,559 18,468
61 Laccaria bicolor S238N-H70 v1.0 57,049,857 19,903
62 Laccaria bicolor S238N-H82 v1.0 52,023,709 18,706
63 Laccaria bicolor S238N-H82xH70 v1.0 42,115,601 17,045
64 Laccaria bicolor S238O v1.0 57,057,526 17,767
65 Laccaria bicolor v2.0 60,707,050 23,130 Martin F et al., 2008
66 Laccaria sp. KIS1 v1.0 231,429,644 40,277
67 Laccaria sp. KIS6 v1.0 165,357,910 38,625
68 Lactarius akahatsu QP v1.0 80,299,772 12,853 Lebreton A et al., 2022
69 Lactarius controversus PMI44 v1.0 90,370,914 13,305
70 Lactarius deliciosus 48 v1.0 96,043,985 18,193 Lebreton A et al., 2022
71 Lactarius hatsudake 109 v1.0 95,486,030 16,831 Lebreton A et al., 2022
72 Lactarius hengduanensis 84 v1.0 61,963,203 15,957 Lebreton A et al., 2022
73 Lactarius indigo 2018DUKE089 v1.0 90,316,074 16,554 Looney B et al., 2022
74 Lactarius psammicola BPL869 v1.0 69,824,043 13,442 Looney B et al., 2022
75 Lactarius pseudohatsudake 88 v1.0 99,708,583 20,824 Lebreton A et al., 2022
76 Lactarius quietus S23C v1.0 115,901,997 18,943 Miyauchi S et al., 2020
77 Lactarius sanguifluus B21 v1.0 86,240,450 17,481 Lebreton A et al., 2022
78 Lactarius subdulcis FM v1.0 110,449,813 14,533
79 Lactarius tabidus Fr. 1825 v1.0 99,988,625 15,926
80 Lactarius vividus 141 v1.0 69,041,955 11,612 Lebreton A et al., 2022
81 Lactifluus cf. subvellereus BPL653 v1.0 44,824,221 12,802 Looney B et al., 2022
82 Lactifluus cf. volemus BPL652 v1.0 62,975,844 14,970 Looney B et al., 2022
83 Lanmaoa asiatica v1.0 46,638,294 14,118 Wu G et al., 2022
84 Leucangium carthusianum GMNB180 v1.0 114,191,169 12,369
85 Mattirolomyces terfezioides MAT_tt4AIII v1.0 50,061,460 10,894
86 Melanogaster broomeianus MBLB.BST v1.0 49,614,189 14,167 Miyauchi S et al., 2020
87 Meliniomyces bicolor E v2.0 82,384,847 18,619 Martino E et al., 2018
88 Meliniomyces sp. PMI_1271 v1.0 62,840,624 17,286
89 Meliniomyces variabilis F v1.0 55,857,776 20,389 Martino E et al., 2018
90 Morchella importuna CCBAS932 v1.0 48,213,273 11,600 Murat C et al., 2018
91 Multifurca ochricompacta BPL690 v1.0 54,697,930 10,514 Looney B et al., 2022
92 Oidiodendron maius Zn v1.0 46,426,256 16,703 Kohler A et al., 2015
93 Paraglomus occultum DAOM 240472 44,932,488 9,286 Malar C M et al., 2022
94 Paragyrodon sphaerosporus FC442 v2.0 41,914,842 11,162
95 Paxillus adelphus Ve08.2h10 v2.0 64,458,135 18,999 Kohler A et al., 2015
96 Paxillus ammoniavirescens Pou09.2 v1.0 35,762,581 13,473 Miyauchi S et al., 2020
97 Paxillus involutus ATCC 200175 v1.0 58,301,126 17,968 Kohler A et al., 2015
98 Phlebopus sp. FC_14 v2.0 36,096,188 9,409 Wu G et al., 2022
99 Phlegmacium glaucopus AT 2004 276 v2.0 63,450,306 20,377 Miyauchi S et al., 2020
100 Picoa lefebvrei Pl1701 v1.0 166,305,171 16,310
101 Piloderma byssinum 4S31 v1.0 94,846,070 22,629
102 Piloderma olivaceum F 1598 v1.0 59,326,866 21,583 Kohler A et al., 2015
103 Piloderma sphaerosporum 354 v1.0 71,854,530 20,118
104 Pisolithus albus SI12 v1.0 87,748,750 17,029 Plett JM et al., 2023
105 Pisolithus capsulifer 3163 v1.0 49,780,365 12,849
106 Pisolithus croceorrhizus ssp. 2 72 v1.0 76,507,182 15,058 Plett JM et al., 2023
107 Pisolithus croceorrhizus subspA 74A v1.0 80,714,400 15,799 Plett JM et al., 2023
108 Pisolithus marmoratus 721 v1.0 77,720,273 17,850
109 Pisolithus marmoratus ssp. 2 16A v1.0 122,384,764 21,754 Plett JM et al., 2023
110 Pisolithus microcarpus 441 v2.0 77,250,852 16,766 Kohler A et al., 2015
111 Pisolithus orientalis OTSU v2.0 57,997,239 12,203 Plett JM et al., 2023
112 Pisolithus sp. B1 v1.0 64,705,422 12,451 Plett JM et al., 2023
113 Pisolithus thermaeus 11 v1.0 81,921,463 15,712 Plett JM et al., 2023
114 Pisolithus tinctorius Marx 270 v2.0 92,528,219 16,924 Kohler A et al., 2015
115 Pisolithus tympanobaculus R1 v1.0 98,413,041 17,658
116 Rhizophagus cerebriforme DAOM 227022 v1.0 136,890,557 21,549 Morin E et al., 2019
117 Rhizophagus clarus HR1 116,418,735 27,761 Kobayashi Y et al., 2018
118 Rhizophagus diaphanus v1.0 125,876,003 23,252 Morin E et al., 2019
119 Rhizophagus irregularis 4401 146,854,905 20,178 Yildirir G et al., 2022
120 Rhizophagus irregularis A1 v2.0 147,088,061 20,492 Yildirir G et al., 2022
121 Rhizophagus irregularis A4 v1.0 138,301,208 25,760 Chen ECH et al., 2018
122 Rhizophagus irregularis A5 v1.0 131,461,109 26,585 Chen ECH et al., 2018
123 Rhizophagus irregularis B3 v2.0 146,830,121 20,098 Yildirir G et al., 2022
124 Rhizophagus irregularis C2 161,924,360 20,735 Yildirir G et al., 2022
125 Rhizophagus irregularis DAOM 181602 v1.0 91,083,792 30,282 Tisserant E et al., 2013
126 Rhizophagus irregularis DAOM197198 v2.0 147,209,168 21,599 Yildirir G et al., 2022
127 Rhizopogon salebrosus TDB-379 v1.0 82,288,552 18,900
128 Rhizopogon truncatus FC74 v1.0 38,907,862 11,852
129 Rhizopogon vesiculosus Smith 43,809,644 14,218 Mujic AB et al., 2017
130 Rhizopogon vinicolor AM-OR11-026 v1.0 36,102,320 14,469 Mujic AB et al., 2017
131 Rhizopogon vulgaris FC72 v1.0 39,902,050 11,905
132 Rhizoscyphus ericae UAMH 7357 v1.0 57,408,471 16,784 Martino E et al., 2018
133 Russula brevipes BPL707 v1.0 48,529,157 14,000 Looney B et al., 2022
134 Russula compacta BPL669 v1.0 45,678,814 10,834 Looney B et al., 2022
135 Russula cyanoxantha BavarianF04 v1.0 102,665,838 15,975
136 Russula decolorans Maridalen v1.0 57,038,028 12,065
137 Russula dissimulans BPL704 v1.0 44,689,478 11,865 Looney B et al., 2022
138 Russula earlei BPL698 v1.0 70,012,961 12,153 Looney B et al., 2022
139 Russula emetica 2018DUKE113 v1.0 73,758,419 13,473
140 Russula emetica Přilba v1.0 55,121,418 13,215 Miyauchi S et al., 2020
141 Russula ochroleuca BavarianF39 v1.0 46,159,605 11,577
142 Russula ochroleuca Přilba v1.0 44,738,512 12,048 Miyauchi S et al., 2020
143 Russula rugulosa BPL654 v1.0 43,452,339 13,281 Looney B et al., 2022
144 Russula seminuda PSC4341-TAS1 v1.0 42,095,537 10,669
145 Russula sp. KIS4 v1.1 77,376,323 12,813
146 Russula sp. KIS8R TL3126 v1.0 72,416,190 13,876
147 Russula sp. SA2 v1.0 72,281,534 11,878
148 Russula sp. TAS8 v1.0 71,058,637 13,017
149 Russula vinacea BPL710 v1.0 43,280,073 12,673 Looney B et al., 2022
150 Scleroderma citrinum Foug A v1.0 56,144,862 21,012 Kohler A et al., 2015
151 Scleroderma citrinum hr. v1.0 77,472,219 10,323 Zhang H et al., 2025
152 Scleroderma yunnanense jo. v1.0 45,547,305 10,194 Zhang H et al., 2025
153 Sebacina vermifera MAFF 305830 v1.0 38,094,242 15,312 Kohler A et al., 2015
154 Serendipita sp. 400 v1.0 38,899,175 10,802
155 Serendipita sp. 405 v1.0 35,358,857 10,849
156 Serendipita sp. 407 v1.0 40,693,196 10,738
157 Serendipita sp. 411 v1.0 38,487,819 10,821
158 Serendipita vermifera ssp. bescii NFPB0129 v1.0 36,850,610 14,208
159 Sistotrema muscicola OMC 1658 v1.0 43,671,079 10,463
160 Sphaerosporella brunnea Sb_GMNB300 v2.0 51,598,955 12,597 Benucci GMN et al., 2019
161 Suillus acidus FC148 v1.0 57,731,579 17,622
162 Suillus americanus EM31 v1.0 50,809,076 17,163 Lofgren LA et al., 2021
163 Suillus ampliporus FC55 v1.0 58,334,580 16,527 Lofgren LA et al., 2021
164 Suillus bovinus UH-Sbo-P2 v1.0 47,496,138 13,537 Lofgren LA et al., 2021
165 Suillus brevipes Sb2 v2.0 52,027,859 21,458 Branco S et al., 2015
166 Suillus brunnescens FC94 v1.1 90,082,639 19,330
167 Suillus cf. sibiricus RUI384 v1.0 106,851,732 21,955
168 Suillus cf. subluteus FC464 v1.0 114,207,342 22,673 Lofgren LA et al., 2021
169 Suillus cf. variegatus FC465 v1.0 52,286,509 16,059
170 Suillus clintonianus FC179 v1.0 46,838,326 15,530 Lofgren LA et al., 2021
171 Suillus collinitus S28 v1.0 82,814,809 16,625
172 Suillus cothurnatus VC 1858 v1.0 94,611,779 19,836 Lofgren LA et al., 2021
173 Suillus decipiens EM49 v1.0 62,784,544 16,894 Lofgren LA et al., 2021
174 Suillus discolor FC423 v1.0 60,609,832 16,510 Lofgren LA et al., 2021
175 Suillus elbensis FC64 v1.0 49,992,238 16,813
176 Suillus fuscotomentosus FC203 v1.0 79,655,913 18,512 Lofgren LA et al., 2021
177 Suillus glandulosipes FC488 v1.0 97,749,994 21,314
178 Suillus granulatus S33 v1.0 38,417,259 12,731
179 Suillus grisellus FC184 v1.0 27,163,220 10,170
180 Suillus hirtellus EM16 v1.0 49,942,187 17,067 Lofgren LA et al., 2021
181 Suillus kaibabensis FC96 v2.0 49,971,042 13,919
182 Suillus lakei FC43 v1.0 79,746,074 19,384 Lofgren LA et al., 2021
183 Suillus luteus 16.09.17.av07 v1.0 39,232,458 13,348
184 Suillus luteus UH-Slu-Lm8-n1 v3.0 44,486,502 16,588 Kohler A et al., 2015
185 Suillus occidentalis FC124 v1.0 57,963,537 16,030 Lofgren LA et al., 2021
186 Suillus ochraceoroseus FC498 v1.0 71,521,688 17,772
187 Suillus paluster FC165 v1.0 61,993,750 16,585 Lofgren LA et al., 2021
188 Suillus placidus DOB743 v1.0 55,323,552 15,123 Lofgren LA et al., 2021
189 Suillus placidus S07 v1.0 45,943,075 14,550
190 Suillus plorans S12 v1.0 51,861,001 16,402 Lofgren LA et al., 2021
191 Suillus pseudogranulatus FC45 v1.0 53,289,868 13,672
192 Suillus punctipes FC325 v1.0 48,707,271 14,249
193 Suillus pungens FC27 v1.0 35,632,633 12,148
194 Suillus quiescens AUS222 v1.0 34,152,517 11,697
195 Suillus quiescens AUS223 v1.0 34,515,209 12,072
196 Suillus quiescens FC197 v1.0 44,533,703 12,066
197 Suillus quiescens FC198 v1.0 27,113,927 12,014
198 Suillus quiescens NZ227 v1.0 38,947,259 12,070
199 Suillus sp. nov. FC429 v1.0 45,274,385 14,111
200 Suillus spraguei EM44 v1.0 87,086,403 19,349 Lofgren LA et al., 2021
201 Suillus subalutaceus FC151 v1.0 64,971,567 17,080 Lofgren LA et al., 2021
202 Suillus subaureus MN1 v1.0 57,660,940 15,740 Lofgren LA et al., 2021
203 Suillus tomentosus FC115 v1.0 53,063,458 17,198 Lofgren LA et al., 2021
204 Suillus variegatus UH-Sva-Z1 v1.0 64,862,609 17,072 Lofgren LA et al., 2021
205 Suillus viscidus S02 v2.0 74,730,232 22,317
206 Suillus weaverae EM37 v1.0 42,341,223 15,802 Lofgren LA et al., 2021
207 Terfezia boudieri ATCC MYA-4762 v1.1 63,234,573 12,114 Murat C et al., 2018
208 Terfezia claveryi T7 v1.0 74,471,381 12,765 Miyauchi S et al., 2020
209 Thelephora ganbajun P2 v1.0 36,335,475 12,643 Miyauchi S et al., 2020
210 Thelephora terrestris UH-Tt-Lm1 v1.0 40,733,037 13,338 Miyauchi S et al., 2020
211 Tirmania nivea G3 v1.0 63,133,441 10,591 Miyauchi S et al., 2020
212 Tricholoma matsutake 945 v3.0 175,759,688 22,885 Miyauchi S et al., 2020
213 Tricholoma populinum 2016PMI031 v1.0 136,995,582 19,692
214 Trichophaea hybrida UTF0779 v1.0 144,183,925 13,308 Miyauchi S et al., 2020
215 Truncocolumella citrina FC456 v1.1 59,412,228 17,048
216 Tuber aestivum var. urcinatum v1.0 144,718,305 9,344 Murat C et al., 2018
217 Tuber borchii Tbo3840 v1.0 97,184,993 12,346 Murat C et al., 2018
218 Tuber brumale v1.0 171,435,277 12,382 Morin E et al., 2021
219 Tuber canaliculatum GB_Tcana1 v1.0 119,018,764 13,111
220 Tuber gibbosum GB_Tgibb2 v1.0 73,833,505 10,490
221 Tuber indicum v1.0 110,494,569 11,872 Morin E et al., 2021
222 Tuber magnatum v1.0 192,781,443 9,433 Murat C et al., 2018
223 Tuber melanosporum Mel28 v1.2 124,945,702 10,058 Martin F et al., 2010
224 Tuber melosporum Tmelo v1.0 114,195,480 14,017
225 Tuber mesentericum Tmes4 v1.0 146,226,558 14,712
226 Tulasnella calospora AL13/4D v1.0 62,392,858 19,659 Kohler A et al., 2015
227 Tulasnella calospora UAMH 9824 v1.0 70,372,952 17,081
228 Tulasnella helicospora OP6.3d v1.0 93,272,447 20,866
229 Tulasnella inquilina UAMH 7632 v1.0 87,139,136 15,519
230 Tulasnella irregularis AM1.12e v1.0 79,304,269 17,148
231 Tulasnella sp 1423-3 v1.0 86,803,333 17,847
232 Tulasnella sp. 419 v1.0 56,294,012 13,314
233 Tulasnella sp. 425 v1.0 76,594,216 18,652
234 Tulasnella sp. 427 v1.0 56,306,249 13,260
235 Tylopilus felleus Maridalen v1.0 39,403,162 12,265
236 Wilcoxina mikolae CBS 423.85 v1.0 117,288,895 13,093 Miyauchi S et al., 2020
237 Xerocomellus pruinatus BavarianF63 v1.0 67,272,853 13,871
238 Xerocomus badius 84.06 v1.0 38,390,415 14,938 Miyauchi S et al., 2020