Due to ongoing NERSC infrastructure upgrades from July 22 through August 3, certain Mycocosm and Phycocosm functions, specifically groups BLAST, are unavailable or impacted. See here for details

Mycocosm/Phycocosm now requires an ORCID account with two-factor authentication for login. Refer to this Help site to make any needed updates to your JGI login account to avoid losing access.

Please note that until July 27, you will still need to log in using your old account in order to download data from the JDP.

To use the tree navigation click a branch name and select an organism from the list.
For MycoCosm, please cite:
Igor V. Grigoriev, Roman Nikitin, Sajeet Haridas, Alan Kuo, Robin Ohm, Robert Otillar, Robert Riley, Asaf Salamov, Xueling Zhao, Frank Korzeniewski, Tatyana Smirnova, Henrik Nordberg, Inna Dubchak, Igor Shabalov, MycoCosm portal: gearing up for 1000 fungal genomes, Nucleic Acids Research, Volume 42, Issue D1, 1 January 2014, Pages D699–D704, DOI:10.1093/nar/gkt1183
For JGI Fungal Program, please cite:
Igor V. Grigoriev, Daniel Cullen, Stephen B. Goodwin, David Hibbett, Thomas W. Jeffries, Christian P. Kubicek, Cheryl Kuske, Jon K. Magnuson, Francis Martin, Joseph W. Spatafora, Adrian Tsang & Scott E. Baker (2011) Fueling the future with fungal genomics, Mycology, 2:3, 192-209, DOI:10.1080/21501203.2011.584577